[maker-devel] Maker not installing
Emmanuel Nnadi
eennadi at gmail.com
Fri Sep 22 13:27:37 MDT 2017
Hello all,
Please how can I determine the following in maker:
1. The total number of chromosomes
2. The size of my genome
Thanks
Nnadi Nnaemeka Emmanuel
Department of Microbiology,
Faculty of Natural and Applied Science,
Plateau State University, Bokkos, Plateau State, Nigeria.
Publications:
https://www.researchgate.net/profile/Emmanuel_Nnadi/publications
On Fri, Sep 1, 2017 at 10:52 PM, Emmanuel Nnadi <eennadi at gmail.com> wrote:
> Ok, thanks.
> Nnadi Nnaemeka Emmanuel
> Department of Microbiology,
> Faculty of Natural and Applied Science,
> Plateau State University, Bokkos, Plateau State, Nigeria.
> Publications: https://www.researchgate.net/profile/Emmanuel_Nnadi/
> publications
>
>
>
> On Sep 1, 2017 10:50 PM, "Carson Holt" <carsonhh at gmail.com> wrote:
>
>> It would need to be a new run. You won't be able to use the updated
>> contig names with the old run.
>>
>> --Carson
>>
>> Sent from my iPhone
>>
>> On Sep 1, 2017, at 3:41 PM, Emmanuel Nnadi <eennadi at gmail.com> wrote:
>>
>> Hi carson
>> Thanks for the tip
>> perl -ane 's/1_S7_R1_001_\(paired\)_trimmed_\(paired\)_//g; print'
>> genome.fasta
>>
>> It worked well however, when i ran it, it removed 1_S7_R1_001_\(paired\)_
>> trimmed_\(paired\)_,
>>
>> I have ran maker with 1_S7_R1_001_\(paired\)_trimmed_\(paired\)_,
>>
>> 1. How can I effect the change when maker has produced some files from
>> the the old sequence?
>>
>> I have spent more than 24 hours running maker and it has produced some
>> folders already.
>>
>> How can I make this change?
>>
>> Thanks
>>
>>
>>
>>
>> Nnadi Nnaemeka Emmanuel
>> Department of Microbiology,
>> Faculty of Natural and Applied Science,
>> Plateau State University, Bokkos, Plateau State, Nigeria.
>> Publications: https://www.researchgate.net/
>> profile/Emmanuel_Nnadi/publications
>>
>> On Fri, Sep 1, 2017 at 4:54 PM, Carson Holt <carsonhh at gmail.com> wrote:
>>
>>> BLAST which is used by MAKER can not handle really long contig names.
>>> MAKER tries to get around this by adding a secondary tag to the fasta
>>> header when long names are detected. Even then it would be better to change
>>> the IDs of your contigs to avoid downstream failures.
>>>
>>> I would recommend removing '1_S7_R1_001_(paired)_trimmed_(paired)_’
>>> from each contig name.
>>>
>>> Example command to do that —>
>>> perl -ane 's/1_S7_R1_001_\(paired\)_trimmed_\(paired\)_//g; print'
>>> genome.fasta
>>>
>>> —Carson
>>>
>>>
>>> On Aug 30, 2017, at 3:54 PM, Emmanuel Nnadi <eennadi at gmail.com> wrote:
>>>
>>> Hi Carson
>>> Thanks for your response its been helpful
>>>
>>> Please bear with me as I work through this
>>>
>>> 1. Please how do I generate EST for my novel sequences?
>>> 2. I am currently running maker without EST and protein sequences is it
>>> wrong? Can it predict properly?
>>> 3. One error in the contig just returned this value
>>> FastaDB::_cleanIndexAndCompact(): Fasta file contains a sequence
>>> identifier which is too long ( max id length = 50 )
>>> at /usr/local/bin/RepeatMasker line 1464.
>>> FastaDB::_cleanIndexAndCompact(): Fasta file contains a sequence
>>> identifier which is too long ( max id length = 50 )
>>> at /usr/local/bin/RepeatMasker line 1464.
>>> FastaDB::_cleanIndexAndCompact(): Fasta file contains a sequence
>>> identifier which is too long ( max id length = 50 )
>>> at /usr/local/bin/RepeatMasker line 1464.
>>> ERROR: RepeatMasker failed
>>> --> rank=NA, hostname=emmannaemekas-MacBook-Pro.local
>>> ERROR: Failed while doing repeat masking
>>> ERROR: Chunk failed at level:0, tier_type:1
>>> FAILED CONTIG:1_S7_R1_001_(paired)_trimmed_(paired)_contig_2
>>>
>>> ERROR: Chunk failed at level:2, tier_type:0
>>> FAILED CONTIG:1_S7_R1_001_(paired)_trimmed_(paired)_contig_2
>>>
>>> examining contents of the fasta file and run log
>>>
>>>
>>> Nnadi Nnaemeka Emmanuel
>>> Department of Microbiology,
>>> Faculty of Natural and Applied Science,
>>> Plateau State University, Bokkos, Plateau State, Nigeria.
>>> Publications: https://www.researchgate.net/
>>> profile/Emmanuel_Nnadi/publications
>>>
>>> On Wed, Aug 30, 2017 at 4:12 PM, Carson Holt <carsonhh at gmail.com> wrote:
>>>
>>>> You can query valid species names using the queryTaxonomyDatabase.pl
>>>> script that comes with RepeatMasker. Try not to be too specific. In general
>>>> you should use the genus rather than the species for example (or even use
>>>> all of RepBase).
>>>>
>>>> Example —>
>>>> perl …/RepeatMasker/util/queryTaxonomyDatabase.pl -species “drosophila"
>>>>
>>>> —Carson
>>>>
>>>>
>>>>
>>>> On Aug 30, 2017, at 9:05 AM, Emmanuel Nnadi <eennadi at gmail.com> wrote:
>>>>
>>>> Hi Carson,
>>>>
>>>> Thanks
>>>> I was able to start using maker.
>>>>
>>>> However I am working with a plant Genome novel. I had set the
>>>> repeatmasking to
>>>> 1. Dcotrep a names from the repbase release but maker returned it back
>>>> as not known to repeat masker
>>>>
>>>> How can I use specific known genomes for repeat masking
>>>> Thanks
>>>>
>>>> Nnadi Nnaemeka Emmanuel
>>>> Department of Microbiology,
>>>> Faculty of Natural and Applied Science,
>>>> Plateau State University, Bokkos, Plateau State, Nigeria.
>>>> Publications: https://www.researchgate.net/
>>>> profile/Emmanuel_Nnadi/publications
>>>>
>>>>
>>>>
>>>> On Aug 29, 2017 4:26 PM, "Carson Holt" <carsonhh at gmail.com> wrote:
>>>>
>>>>> MAKER will read the genome= options from the maker_opts.ctl file in
>>>>> your current directory or the maker_opts.ctl you specified on the command
>>>>> line. The error means you have left the value empty. Perhaps you did not
>>>>> save the changes you made or you did not specify the location of
>>>>> the maker_opts.ctl file to use.
>>>>>
>>>>> You can check the contents of the file using cat. Example —>
>>>>> cat maker_opts.ctl
>>>>>
>>>>> —Carson
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> On Aug 29, 2017, at 5:11 AM, Emmanuel Nnadi <eennadi at gmail.com> wrote:
>>>>>
>>>>> Hi Carson,
>>>>> Thanks a lot for yesterday. I was able to resolve the issue of running
>>>>> maker and i followed the commands in the tutorial.
>>>>> I however encountered another problem
>>>>>
>>>>> when I ran the command nano -c maker_opts.ctl
>>>>>
>>>>> It gave the following *1_S7_assembly.fa I specified the name of the
>>>>> genome but when I ran maker in another tab it gave *
>>>>>
>>>>> #-----Genome (these are always required)
>>>>> genome=*1_S7_assembly.fa* #genome sequence (fasta file or fasta
>>>>> embeded in GFF3 file)
>>>>> organism_type=eukaryotic #eukaryotic or prokaryotic. Default is
>>>>> eukaryotic
>>>>>
>>>>> #-----Re-annotation Using MAKER Derived GFF3
>>>>> maker_gff= #MAKER derived GFF3 file
>>>>> est_pass=0 #use ESTs in maker_gff: 1 = yes, 0 = no
>>>>> altest_pass=0 #use alternate organism ESTs in maker_gff: 1 = yes, 0 =
>>>>> no
>>>>> protein_pass=0 #use protein alignments in maker_gff: 1 = yes, 0 = no
>>>>> rm_pass=0 #use repeats in maker_gff: 1 = yes, 0 = no
>>>>> model_pass=0 #use gene models in maker_gff: 1 = yes, 0 = no
>>>>> pred_pass=0 #use ab-initio predictions in maker_gff: 1 = yes, 0 = no
>>>>> other_pass=0 #passthrough anyything else in maker_gff: 1 = yes, 0 = no
>>>>>
>>>>> #-----EST Evidence (for best results provide a file for at least one)
>>>>> est= #set of ESTs or assembled mRNA-seq in fasta format
>>>>> altest= #EST/cDNA sequence file in fasta format from an alternate
>>>>> organism
>>>>> est_gff= #aligned ESTs or mRNA-seq from an external GFF3 file
>>>>> altest_gff= #aligned ESTs from a closly relate species in GFF3 format
>>>>>
>>>>> #-----Protein Homology Evidence (for best results provide a file for
>>>>> at least one)
>>>>> protein= #protein sequence file in fasta format (i.e. from mutiple
>>>>> oransisms)
>>>>> protein_gff= #aligned protein homology evidence from an external GFF3
>>>>> file
>>>>>
>>>>> #-----Repeat Masking (leave values blank to skip repeat masking)
>>>>> model_org=all #select a model organism for RepBase masking in
>>>>> RepeatMasker
>>>>> rmlib= #provide an organism specific repeat library in fasta format
>>>>> for RepeatMasker
>>>>> repeat_protein=/Users/emmannaemeka/Desktop/Gpm/maker/data/te_proteins.fasta
>>>>> #provide a fasta file of transposable element proteins for RepeatRunner
>>>>> rm_gff= #pre-identified repeat elements from an external GFF3 file
>>>>> prok_rm=0 #forces MAKER to repeatmask prokaryotes (no reason to change
>>>>> this), 1 = yes, 0 = no
>>>>> softmask=1 #use soft-masking rather than hard-masking in BLAST (i.e.
>>>>> seg and dust filtering)
>>>>>
>>>>>
>>>>> *I ran maker command on another tab and it returned the following*
>>>>> STATUS: Parsing control files...
>>>>> ERROR: You have failed to provide a value for 'genome' in the control
>>>>> files.
>>>>>
>>>>> --> rank=NA, hostname=emmannamekasMBP
>>>>>
>>>>>
>>>>> Questions
>>>>> 1. Specifying the genome location, do I need to run maker on the same
>>>>> tab or open another bash tab?
>>>>> 2. My genome is novel and do not have proteins, how do I generate
>>>>> protein fast for the de novo sequence and EST?
>>>>>
>>>>>
>>>>> Thanks
>>>>>
>>>>> Nnadi Nnaemeka Emmanuel
>>>>> Department of Microbiology,
>>>>> Faculty of Natural and Applied Science,
>>>>> Plateau State University, Bokkos, Plateau State, Nigeria.
>>>>> Publications: https://www.researchgate.net/
>>>>> profile/Emmanuel_Nnadi/publications
>>>>>
>>>>> On Mon, Aug 28, 2017 at 6:47 PM, Carson Holt <carsonhh at gmail.com>
>>>>> wrote:
>>>>>
>>>>>> Here is a class on how to use MAKER taught a couple of years back —>
>>>>>> http://weatherby.genetics.utah.edu/MAKER/wiki/index.php/M
>>>>>> AKER_Tutorial_for_GMOD_Online_Training_2014
>>>>>>
>>>>>> There is also a linked video as well as an amazon image of the class
>>>>>> material where you can run the image in the cloud and follow along.
>>>>>>
>>>>>> Thanks,
>>>>>> Carson
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> On Aug 28, 2017, at 11:43 AM, Emmanuel Nnadi <eennadi at gmail.com>
>>>>>> wrote:
>>>>>>
>>>>>> Hi Carson,
>>>>>> Thanks a lot
>>>>>>
>>>>>> I ran this command maker -h it returned the following
>>>>>>
>>>>>> The last thing I wish to ask you, how can I load my genome fine and
>>>>>> being annotation?
>>>>>>
>>>>>> Thanks
>>>>>>
>>>>>> emmannamekasMBP:maker emmannaemeka$ maker -h
>>>>>>
>>>>>> MAKER version 2.31.9
>>>>>>
>>>>>> Usage:
>>>>>>
>>>>>> maker [options] <maker_opts> <maker_bopts> <maker_exe>
>>>>>>
>>>>>>
>>>>>> Description:
>>>>>>
>>>>>> MAKER is a program that produces gene annotations in GFF3 format
>>>>>> using
>>>>>> evidence such as EST alignments and protein homology. MAKER can
>>>>>> be used to
>>>>>> produce gene annotations for new genomes as well as update
>>>>>> annotations
>>>>>> from existing genome databases.
>>>>>>
>>>>>> The three input arguments are control files that specify how
>>>>>> MAKER should
>>>>>> behave. All options for MAKER should be set in the control
>>>>>> files, but a
>>>>>> few can also be set on the command line. Command line options
>>>>>> provide a
>>>>>> convenient machanism to override commonly altered control file
>>>>>> values.
>>>>>> MAKER will automatically search for the control files in the
>>>>>> current
>>>>>> working directory if they are not specified on the command line.
>>>>>>
>>>>>> Input files listed in the control options files must be in fasta
>>>>>> format
>>>>>> unless otherwise specified. Please see MAKER documentation to
>>>>>> learn more
>>>>>> about control file configuration. MAKER will automatically try
>>>>>> and
>>>>>> locate the user control files in the current working directory
>>>>>> if these
>>>>>> arguments are not supplied when initializing MAKER.
>>>>>>
>>>>>> It is important to note that MAKER does not try and recalculated
>>>>>> data that
>>>>>> it has already calculated. For example, if you run an analysis
>>>>>> twice on
>>>>>> the same dataset you will notice that MAKER does not rerun any
>>>>>> of the
>>>>>> BLAST analyses, but instead uses the blast analyses stored from
>>>>>> the
>>>>>> previous run. To force MAKER to rerun all analyses, use the -f
>>>>>> flag.
>>>>>>
>>>>>> MAKER also supports parallelization via MPI on computer
>>>>>> clusters. Just
>>>>>> launch MAKER via mpiexec (i.e. mpiexec -n 40 maker). MPI support
>>>>>> must be
>>>>>> configured during the MAKER installation process for this to
>>>>>> work though
>>>>>>
>>>>>>
>>>>>> Options:
>>>>>>
>>>>>> -genome|g <file> Overrides the genome file path in the
>>>>>> control files
>>>>>>
>>>>>> -RM_off|R Turns all repeat masking options off.
>>>>>>
>>>>>> -datastore/ Forcably turn on/off MAKER's two deep
>>>>>> directory
>>>>>> nodatastore structure for output. Always on by default.
>>>>>>
>>>>>> -old_struct Use the old directory styles (MAKER 2.26 and
>>>>>> lower)
>>>>>>
>>>>>> -base <string> Set the base name MAKER uses to save output
>>>>>> files.
>>>>>> MAKER uses the input genome file name by
>>>>>> default.
>>>>>>
>>>>>> -tries|t <integer> Run contigs up to the specified number of
>>>>>> tries.
>>>>>>
>>>>>> -cpus|c <integer> Tells how many cpus to use for BLAST
>>>>>> analysis.
>>>>>> Note: this is for BLAST and not for MPI!
>>>>>>
>>>>>> -force|f Forces MAKER to delete old files before
>>>>>> running again.
>>>>>> This will require all blast analyses to be rerun.
>>>>>>
>>>>>> -again|a recaculate all annotations and output files
>>>>>> even if no
>>>>>> settings have changed. Does not delete old analyses.
>>>>>>
>>>>>> -quiet|q Regular quiet. Only a handlful of status
>>>>>> messages.
>>>>>>
>>>>>> -qq Even more quiet. There are no status
>>>>>> messages.
>>>>>>
>>>>>> -dsindex Quickly generate datastore index file. Note
>>>>>> that this
>>>>>> will not check if run settings have changed
>>>>>> on contigs
>>>>>>
>>>>>> -nolock Turn off file locks. May be usful on some
>>>>>> file systems,
>>>>>> but can cause race conditions if running in
>>>>>> parallel.
>>>>>>
>>>>>> -TMP Specify temporary directory to use.
>>>>>>
>>>>>> -CTL Generate empty control files in the current
>>>>>> directory.
>>>>>>
>>>>>> -OPTS Generates just the maker_opts.ctl file.
>>>>>>
>>>>>> -BOPTS Generates just the maker_bopts.ctl file.
>>>>>>
>>>>>> -EXE Generates just the maker_exe.ctl file.
>>>>>>
>>>>>> -MWAS <option> Easy way to control mwas_server for
>>>>>> web-based GUI
>>>>>>
>>>>>> options: STOP
>>>>>> START
>>>>>> RESTART
>>>>>>
>>>>>> -version Prints the MAKER version.
>>>>>>
>>>>>> -help|? Prints this usage statement.
>>>>>>
>>>>>>
>>>>>> Nnadi Nnaemeka Emmanuel
>>>>>> Department of Microbiology,
>>>>>> Faculty of Natural and Applied Science,
>>>>>> Plateau State University, Bokkos, Plateau State, Nigeria.
>>>>>> Publications: https://www.researchgate.net/
>>>>>> profile/Emmanuel_Nnadi/publications
>>>>>>
>>>>>> On Mon, Aug 28, 2017 at 6:36 PM, Carson Holt <carsonhh at gmail.com>
>>>>>> wrote:
>>>>>>
>>>>>>> Path needs to be a list of directories to search (you specified an
>>>>>>> executable location).
>>>>>>>
>>>>>>> So not this —> /Users/emmannaemeka/Desktop/Gpm/maker/bin/maker
>>>>>>>
>>>>>>> Instead it needs to be this —> /Users/emmannaemeka/Desktop
>>>>>>> /Gpm/maker/bin
>>>>>>>
>>>>>>> —Carson
>>>>>>>
>>>>>>>
>>>>>>> On Aug 28, 2017, at 11:32 AM, Emmanuel Nnadi <eennadi at gmail.com>
>>>>>>>
>>>>>>> wrote:
>>>>>>>
>>>>>>> Thanks
>>>>>>>
>>>>>>> I tried to export PATH
>>>>>>>
>>>>>>> running
>>>>>>> echo $PATH in the maker directory this returned
>>>>>>>
>>>>>>> /usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/Users/emmannaeme
>>>>>>> ka/Desktop/Gpm/maker/bin/maker
>>>>>>>
>>>>>>> 1. Does it mean that PATH has been exported?
>>>>>>>
>>>>>>>
>>>>>>> secondly,
>>>>>>>
>>>>>>> I tried to run
>>>>>>> the command maker -h, which maker, maker -CTL
>>>>>>>
>>>>>>> nothing returned.
>>>>>>>
>>>>>>> 2. how do i start up maker?
>>>>>>> 3. Do I need to be in maker directory to start maker?
>>>>>>>
>>>>>>> Thanks
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> Nnadi Nnaemeka Emmanuel
>>>>>>> Department of Microbiology,
>>>>>>> Faculty of Natural and Applied Science,
>>>>>>> Plateau State University, Bokkos, Plateau State, Nigeria.
>>>>>>> Publications: https://www.researchgate.net/
>>>>>>> profile/Emmanuel_Nnadi/publications
>>>>>>>
>>>>>>> On Mon, Aug 28, 2017 at 4:49 PM, Carson Holt <carsonhh at gmail.com>
>>>>>>> wrote:
>>>>>>>
>>>>>>>> After install the executables will be in the …/maker/bin directory.
>>>>>>>> Example (if you did the install in your home directory) —> ~/maker/bin/maker
>>>>>>>>
>>>>>>>> You need to add the …/maker/bin directory to your PATH for it to be
>>>>>>>> found just by typing ‘maker'
>>>>>>>>
>>>>>>>> Explanation of the Linux PATH —> http://www.linfo.org/path_e
>>>>>>>> nv_var.html
>>>>>>>>
>>>>>>>> —Carson
>>>>>>>>
>>>>>>>>
>>>>>>>> On Aug 28, 2017, at 8:07 AM, Ence,daniel <d.ence at ufl.edu> wrote:
>>>>>>>>
>>>>>>>> Sorry I should have typed “maker -CTL”. If that doesn’t work, what
>>>>>>>> is the result of “which maker”?
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On Aug 28, 2017, at 10:00 AM, Emmanuel Nnadi <eennadi at gmail.com>
>>>>>>>> wrote:
>>>>>>>>
>>>>>>>> Hi Daniel
>>>>>>>> The reply is
>>>>>>>> emmannamekasMBP:maker emmannaemeka$ MAKER -ctl
>>>>>>>> -bash: MAKER: command not found
>>>>>>>>
>>>>>>>> Nnadi Nnaemeka Emmanuel
>>>>>>>> Department of Microbiology,
>>>>>>>> Faculty of Natural and Applied Science,
>>>>>>>> Plateau State University, Bokkos, Plateau State, Nigeria.
>>>>>>>> Publications: https://www.researchgate.net/
>>>>>>>> profile/Emmanuel_Nnadi/publications
>>>>>>>>
>>>>>>>> On Mon, Aug 28, 2017 at 2:57 PM, Ence,daniel <d.ence at ufl.edu>
>>>>>>>> wrote:
>>>>>>>>
>>>>>>>>> Hi, It looks like MAKER installed ok. What is the command that you
>>>>>>>>> used to try to run MAKER? Can you show the result of running “MAKER -ctl”?
>>>>>>>>>
>>>>>>>>> Thanks,
>>>>>>>>> Daniel Ence
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> On Aug 28, 2017, at 9:24 AM, Emmanuel Nnadi <eennadi at gmail.com>
>>>>>>>>> wrote:
>>>>>>>>>
>>>>>>>>> Hi Ence,
>>>>>>>>> Thanks for your reply,
>>>>>>>>>
>>>>>>>>> This is the step and error received
>>>>>>>>>
>>>>>>>>> emmannamekasMBP:src emmannaemeka$ ./build install
>>>>>>>>> Installing MAKER...
>>>>>>>>> Building MAKER
>>>>>>>>> Skip /Users/emmannaemeka/desktop/Gpm/maker/src/../perl/config-darwin-thread-multi-2level-5.018002 (unchanged)
>>>>>>>>>
>>>>>>>>> The build status is
>>>>>>>>> =============================================================================
>>>>>>>>> STATUS MAKER v2.31.9==============================================================================
>>>>>>>>> PERL Dependencies: VERIFIED
>>>>>>>>> External Programs: VERIFIED
>>>>>>>>> External C Libraries: VERIFIED
>>>>>>>>> MPI SUPPORT: DISABLED
>>>>>>>>> MWAS Web Interface: DISABLED
>>>>>>>>> MAKER PACKAGE: CONFIGURATION OK
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> Nnadi Nnaemeka Emmanuel
>>>>>>>>> Department of Microbiology,
>>>>>>>>> Faculty of Natural and Applied Science,
>>>>>>>>> Plateau State University, Bokkos, Plateau State, Nigeria.
>>>>>>>>> Publications: https://www.researchgate.net/
>>>>>>>>> profile/Emmanuel_Nnadi/publications
>>>>>>>>>
>>>>>>>>> On Mon, Aug 28, 2017 at 2:00 PM, Ence,daniel <d.ence at ufl.edu>
>>>>>>>>> wrote:
>>>>>>>>>
>>>>>>>>>> Hi Emmanuel, In order for anyone to help you, you need post to
>>>>>>>>>> the mailing list the command and output (including errors) of the step that
>>>>>>>>>> didn’t work.
>>>>>>>>>>
>>>>>>>>>> Thanks,
>>>>>>>>>> Daniel Ence
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> On Aug 27, 2017, at 10:16 AM, Emmanuel Nnadi <eennadi at gmail.com>
>>>>>>>>>> wrote:
>>>>>>>>>>
>>>>>>>>>> Hello all,
>>>>>>>>>>
>>>>>>>>>> I downloaded Maker and tried to install it. I succeeded in
>>>>>>>>>> installing all prerequisites however running maker ./build install, it
>>>>>>>>>> showed that maker installed.
>>>>>>>>>>
>>>>>>>>>> However trying to run maker it wouldn't run.
>>>>>>>>>>
>>>>>>>>>> Please how do I install maker to run on local computer?
>>>>>>>>>>
>>>>>>>>>> Thanks
>>>>>>>>>>
>>>>>>>>>> Nnadi Nnaemeka Emmanuel
>>>>>>>>>> Department of Microbiology,
>>>>>>>>>> Faculty of Natural and Applied Science,
>>>>>>>>>> Plateau State University, Bokkos, Plateau State, Nigeria.
>>>>>>>>>> Publications: https://www.researchgate.net/
>>>>>>>>>> profile/Emmanuel_Nnadi/publications
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> _______________________________________________
>>>>>>>>>> maker-devel mailing list
>>>>>>>>>> maker-devel at box290.bluehost.com
>>>>>>>>>> http://box290.bluehost.com/mailman/listinfo/maker-devel_yand
>>>>>>>>>> ell-lab.org
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>
>>>>>>>> _______________________________________________
>>>>>>>> maker-devel mailing list
>>>>>>>> maker-devel at box290.bluehost.com
>>>>>>>> http://box290.bluehost.com/mailman/listinfo/maker-devel_yand
>>>>>>>> ell-lab.org
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>
>>>
>>>
>>
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