July 2018 Archives by thread

• Messages sorted by: [ subject ] [ author ] [ date ]
• More info on this list...

Starting: Tue Jul 3 05:57:56 MDT 2018
Ending: Tue Jul 31 06:59:58 MDT 2018
Messages: 15

• [maker-devel] Genemark XXX.mod files   Jennifer Anderson
• [maker-devel] Genemark XXX.mod files   Jason Stajich
• [maker-devel] Maker Error : Thread 1 terminated abnormally.. André Machado <andremmachado25 at gmail.com> AttachmentsJun 26 (8 days ago) to maker-devel Hi , First of all thanks for your efforts in Maker pipeline. Its a tremendous help for the people that works with genomes. In the last 4 days i have broke my head.. with an error .. but still without a solution. I found this old thread: https://groups.google.com/forum/#!msg/maker-devel/X2-76BH9gvg/rU4kLJ3B6tsJ Seems to be a quite similar... but don't point to a specific solution. I have run maker with the data test and all runned ok. Maker finalize the entire process without errors. Recently, i’m trying to aplly my own data on MPI cluster. But this error, frequently occurred. Thread 1 terminated abnormally: ../dna.maker.output/mpi_blastdb/dna%2Efa.mpi.1/dna%2Efa.mpi.1.0 --> rank=8, hostname=compute-0-1.local, at ../Analysis/Geno/maker/bin/maker line 1451 thread 1. --> rank=8, hostname=compute-0-1.local deleted:0 hits deleted:0 hits preparing ab-ini   André Machado
• [maker-devel] Maker Error : Thread 1 terminated abnormally.. André Machado <andremmachado25 at gmail.com> AttachmentsJun 26 (8 days ago) to maker-devel Hi , First of all thanks for your efforts in Maker pipeline. Its a tremendous help for the people that works with genomes. In the last 4 days i have broke my head.. with an error .. but still without a solution. I found this old thread: https://groups.google.com/forum/#!msg/maker-devel/X2-76BH9gvg/rU4kLJ3B6tsJ Seems to be a quite similar... but don't point to a specific solution. I have run maker with the data test and all runned ok. Maker finalize the entire process without errors. Recently, i’m trying to aplly my own data on MPI cluster. But this error, frequently occurred. Thread 1 terminated abnormally: ../dna.maker.output/mpi_blastdb/dna%2Efa.mpi.1/dna%2Efa.mpi.1.0 --> rank=8, hostname=compute-0-1.local, at ../Analysis/Geno/maker/bin/maker line 1451 thread 1. --> rank=8, hostname=compute-0-1.local deleted:0 hits deleted:0 hits preparing ab-ini   Carson Holt
• [maker-devel] How sensitive is MAKER to redundant/partial transcripts?   Lior Glick
• [maker-devel] How sensitive is MAKER to redundant/partial transcripts?   Lior Glick
• [maker-devel] How sensitive is MAKER to redundant/partial transcripts?   Carson Holt
• [maker-devel] How sensitive is MAKER to redundant/partial transcripts?   Carson Holt
• [maker-devel] Ask for help about the collapse of Maker (version 2.31.9) when annotated with Fgenesh   史俊鹏
• [maker-devel] [CAUTION: Suspicious Link] map_forward=1 not mapping reference ID's to output correctly   Carson Holt
• [maker-devel] Maker Error : Thread 1 terminated abnormally..   Carson Holt
• [maker-devel] MAKER chooser algorithm   Timo Metz
• [maker-devel] Annotation of a new variant within a species   Lior Glick
• [maker-devel] Maker ignores evidence and just returns gffs with genome contigs   Ganote, Carrie L
• [maker-devel] Few alternative isoforms when alt_splice=0   Ju Roscito

Last message date: Tue Jul 31 06:59:58 MDT 2018
Archived on: Thu Oct 17 14:33:29 MDT 2024

• Messages sorted by: [ subject ] [ author ] [ date ]
• More info on this list...