[maker-devel] Curious pattern in AED distributions

Carson Holt carsonhh at gmail.com
Mon Apr 8 10:51:55 MDT 2019


Try also adding 2 exon models to the graph. It would be interesting to see if these are attempted single-exon models where the predictor added a micro-intron to keep the open reading frame going against a single exon blastx hint.

—Carson


> On Apr 8, 2019, at 3:10 AM, Lior Glick <liorglic at mail.tau.ac.il> wrote:
> 
> Hi again - quick update:
> I made a plot comparing the histograms of single-exon genes to multi-exon genes:
> <newplot (5).png>
> It definitely looks like single-exon genes are enriched for the 0.5 score, but it does not account for the entire surge, as there also seem to be lots of multi-exon genes involved. This may suggest that the 0.5 peak is a result of multiple effects buried within the software.
> Any other thoughts/suggestions?
> 
> Thanks again,
> 

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