[maker-devel] Maker crash with big protein evidence ?

Patrick Tran Van patrick.tranvan at unil.ch
Tue Jan 15 02:54:42 MST 2019


Hi,


I run maker with mpi and default option.

It works well with swissprot/uniprot as protein evidence but I wanted to provide a larger database (nr) and it run for a while but for longer scaffold it crashs after this :


in cluster::shadow_cluster...
 sorting hits in shadow cluster...
 j_size:3   current j:0
 j_size:3   current j:1
 j_size:3   current j:2
...finished clustering.


Did you already face something similar ?


Thanks.


Patrick
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