[maker-devel] Failed to run maker after install
Abdulmalek Algarni
atalgarni at gmail.com
Wed May 22 05:51:29 MDT 2019
Hi there,
I having a problem when running maker after installing it following the installation instructions. All the excutables located at …/maker/bin works show no error, except for the maker it show an error :
Abdulmaleks-Mac-Pro:bin abdulmalek$ ./maker -h
Couldn't find an appropriate DIRECTORY for Inline to use.
at /Library/Perl/5.18/Bio/DB/IndexedBase.pm line 251.
BEGIN failed--compilation aborted at /Library/Perl/5.18/Bio/DB/IndexedBase.pm line 282.
Compilation failed in require at (eval 27) line 2.
...propagated at /System/Library/Perl/5.18/base.pm line 84.
BEGIN failed--compilation aborted at /Library/Perl/5.18/Bio/DB/Fasta.pm line 137.
Compilation failed in require at ./maker line 62.
BEGIN failed--compilation aborted at ./maker line 62.
For the other excutables here is an example :
Abdulmaleks-Mac-Pro:bin abdulmalek$ ./cegma2zff
Usage:
cegma2zff <cegma_gff> <genome_fasta>
This script converts the output GFF file from CEGMA into ZFF format
for use in SNAP training. Output files are always genome.ann and
genome.dna.
Best regards,
Abdulmalek
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