[maker-devel] Maker failing

[Boyher, Adam]

Hi
I’ve been having this issue for a few weeks with Maker. I thought it was just a memory issue, I’ve recently started annotating a larger genome with more evidence. But I’m not sure that’s the issue anymore. The most recent run yielded this error:

ERROR: The file /scratch/dir_60712/maker_h8TIEf/12/Chromosome10_0.7125796-7129044.RNAseqTISSUE_Chromosome06_0%3A14710146-14710774.e.exonerate appears to be incomplete
MAKER will need to delete the file, before trying again

--> rank=12, hostname=pacifica.datasci.danforthcenter.org
ERROR: Failed while polishig ESTs
ERROR: Chunk failed at level:2, tier_type:3
FAILED CONTIG:Chromosome10_0


Any idea what could cause that?

Adam

Sent from Mail<https://go.microsoft.com/fwlink/?LinkId=550986> for Windows 10

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/attachments/20200116/cd7ec531/attachment-0003.html>