[maker-devel] Maker2 changelog and Maker3

Xabier Vázquez-Campos xvazquezc at gmail.com
Tue Jun 2 00:57:26 MDT 2020


Hi Carson,

I was looking for some Maker-related stuff (not important what) and I
realised that there was a new release in April for Maker 2 and Maker 3 was
not in beta anymore.

We have been using Maker 2.31.9 in our cluster for a few years now and
while the new (2.31.11) includes the most recent change
(maker_functional_fasta and maker_functional_gff handle newer
UniProt/Swiss-Prot format. Also fix for newer genemark command line
structure) I can't find what changed in 2.31.10 nor a general changelog.
By the way, do you know when (version) the genemark command line structure
changed? What about the Uniprot format?

Also, is there any fundamental difference aside of the integration of EVM
in Maker3 vs Maker2? I found this entry from 2 years ago and wanted to
check if this is still the case.
http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/2018-August/003279.html

Thank you,
Xabi


PS: is there a way to receive notifications for new releases? I didn't
notice anything in the mail list
-- 
Xabier Vázquez-Campos, *PhD*
*Research Associate*
NSW Systems Biology Initiative
School of Biotechnology and Biomolecular Sciences
The University of New South Wales
Sydney NSW 2052 AUSTRALIA
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