[maker-devel] maker2jbrowse error: Don't know how to format iprscan tracks, skipping

[shore at yorku.ca]

Hello,

I've been attempting to include the iprscan results with my maker gff file.

I used the   script below to add the iprscan results to my maker gff:

ipr_update_gff maker.gff iprscan.tsv > makeriprscan.gff

I also used the script below to generate a gff of iprscan domains

iprscan2gff3 iprscan.tsv maker.gff > iprscandomain.gff

At this point, I wasn't sure how to proceed.
I concatenated the iprscandomain.gff to the end of the makeriprscan.gff.

And then ran maker2jbrowse, everything seems to work except I get error message

 "Don't know how to format iprscan tracks, skipping"

If I view the file under jbrowse I can certainly see the iprscan results when I
click on a transcript, but there are no tracks of iprscan results in the
jbrowse.

Sorry, this is a bit long winded.

I suspect perhaps that concatenating the two GFFs was perhaps not the right way
to proceed?

Thanks
Joel
-- 
Dr. Joel S. Shore
Prof. Biology
York University