[maker-devel] CRL_Step2 will not produce required outputs

[Emmanuel Nnadi]

Please I am trying to to follow this tutorial
http://weatherby.genetics.utah.edu/MAKER/wiki/index.php/Repeat_Library_Construction-Advanced
.

Running this step perl DIR_CRL/CRL_Step2.pl --step1
CRL_Step1_Passed_Elements.txt --repeatfile seqfile.out99 --resultfile
seqfile.result99 \

--sequencefile seqfile --removed_repeats   CRL_Step2_Passed_Elements.fasta

the expected output ought to be CRL_Step2_Passed_Elements.fasta

Repeat_*.fasta files


But am only getting CRL_Step2_Passed_Elements.fasta with no Repeat_*.fasta
files


Please what could be the problem?
Nnadi Nnaemeka Emmanuel,Ph.D
Department of Microbiology,
Faculty of Natural and Applied Science,
Plateau State University, Bokkos, Plateau State, Nigeria.
+2348068124819
Publications:
 https://www.researchgate.net/profile/Emmanuel_Nnadi/publications
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