[maker-devel] Fatal error in PMPI_Send

[Patrick Tran Van]

Hi,


I have this strange error that kill my job and tthat seems to occur randomly:


running  est2genome search.
#--------- command -------------#
Widget::exonerate::est2genome:
exonerate  -q /tmp/maker_JZ_DUt/12/MSTRG%2E13631%2E1.for.154952409-154955259.12.fasta -t /tmp/maker_JZ_DUt/12/Tps_LRv5b_scf2.154952409-154955259.12.fasta -Q dna -T dna --model est2genome  --minintron 20 --maxintron 100000 --showcigar --percent 20 > /tmp/maker_JZ_DUt/12/Tps_LRv5b_scf2.154952409-154955259.MSTRG%2E13631%2E1.e.exonerate
#-------------------------------#
Fatal error in PMPI_Send: Invalid count, error stack:
PMPI_Send(159): MPI_Send(buf=0x7f526282e010, count=-1326766804, MPI_CHAR, dest=22, tag=9999, MPI_COMM_WORLD) failed
PMPI_Send(99).: Negative count, value is -1326766804




Do you know what could be the problem ?


Best,


Patrick Tran Van

Bioinformatician: Lab Chapuisat & Schwander
Department of Ecology and Evolution
University of Lausanne
Lausanne - Switzerland
Office 3206
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