[maker-devel] MAKER - error in gene prediction of SNAP
An-I Tsai
aitsai at smail.nchu.edu.tw
Sat Jul 3 03:43:43 MDT 2021
Dear MAKER support team,
I am using MAKER 3.01.03 to do gene prediction. But the error about SNAP
occurred.
There is no further error in previous files and the STDERR.
Besides, MAKER could work successfully with augustus parameter provided,
but the error would occur with SNAP hmm file specified.
SNAP could also work successfully individually. I am not sure my guess is
right or not, bur It seems that the problem was triggered between MAKER and
SNAP.
Can't locate object method "add_entry" via package "1" (perhaps you forgot
to load "1"?) at /home/aitsai/anaconda3/envs/maker/bin/../lib/Widget/snap.pm
line 540.
--> rank=4, hostname=origo
ERROR: Failed while annotating transcripts
ERROR: Chunk failed at level:1, tier_type:4
FAILED CONTIG:000004F
I am wondering what is package "1" specified in the error message.
Appreciate a lot if you have any ideas in solving this problem.
Thank you.
Best regards,
An-I
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