From jy526 at cornell.edu Wed Aug 10 19:02:04 2022 From: jy526 at cornell.edu (Jingyin Yu) Date: Thu, 11 Aug 2022 01:02:04 -0000 Subject: [maker-devel] ERROR: Unknown strand in GFFDB::_sort_exons! Message-ID: Hello All, I ran maker3 and got the error message, but did not get way how to solve it, ############################################## ERROR: Unknown strand in GFFDB::_sort_exons! --> rank=NA, hostname=swift ERROR: Failed while doing repeat masking ERROR: Chunk failed at level:0, tier_type:1 FAILED CONTIG:chr1 ERROR: Chunk failed at level:2, tier_type:0 FAILED CONTIG:chr1 examining contents of the fasta file and run log ############################################## I am not sure if you guys can give me some suggestions. Thanks a lot. Best, Jingyin PostDoc, Boyce Thompson Institute for Plant Research? Cornell University? Ithaca, NY 14853? Email: jy526 at cornell.edu ? -------------- next part -------------- An HTML attachment was scrubbed... URL: From jy526 at cornell.edu Wed Aug 10 19:02:04 2022 From: jy526 at cornell.edu (Jingyin Yu) Date: Thu, 11 Aug 2022 01:02:04 -0000 Subject: [maker-devel] ERROR: Unknown strand in GFFDB::_sort_exons! Message-ID: Hello All, I ran maker3 and got the error message, but did not get way how to solve it, ############################################## ERROR: Unknown strand in GFFDB::_sort_exons! --> rank=NA, hostname=swift ERROR: Failed while doing repeat masking ERROR: Chunk failed at level:0, tier_type:1 FAILED CONTIG:chr1 ERROR: Chunk failed at level:2, tier_type:0 FAILED CONTIG:chr1 examining contents of the fasta file and run log ############################################## I am not sure if you guys can give me some suggestions. Thanks a lot. Best, Jingyin PostDoc, Boyce Thompson Institute for Plant Research? Cornell University? Ithaca, NY 14853? Email: jy526 at cornell.edu ? -------------- next part -------------- An HTML attachment was scrubbed... URL: