[maker-devel] Maker always fails to run on a particular chromosome.

WIIE AY aywiiee at gmail.com
Sun Oct 23 00:08:35 MDT 2022


Hi,

Thanks for this excellent software.
However, when we annotated a rice genome (chr1-12) using Maker/3.01.03, the
first round ran very well.
When we added the snap and gmhmm models in the second round, only chr04
always failed in 12 chromosomes.
Here is my chr4_run.log, stderr.out.(Maybe need maker_opts.ctl.)
Looking forward to your reply.

 maker_opts.ctl
<https://drive.google.com/file/d/1TCjAPWGbQSMA4g49wQWySzROvsCY_rRg/view?usp=drive_web>
 run.log
<https://drive.google.com/file/d/1li8Fn-AjOFfbLmcF_PFwpI6Eq-q9qeGs/view?usp=drive_web>
 stderr_73012967.err
<https://drive.google.com/file/d/1hEYAcxgyLNeuWCHOcKQbpwyCesfWDHbg/view?usp=drive_web>
THANKS
Peter
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/attachments/20221023/3e16fc32/attachment.html>


More information about the maker-devel mailing list