Sequencing diverse plant species of evolutionary, agricultural, and medicinal interest is becoming routine for even small groups - genome annotation and analysis is much less so. The MAKER-P pipeline is designed to make the annotation of novel plant genomes tractable for small groups with limited bioinformatics experience and resources, and faster and more transparent for large groups with more experience and resources. The MAKER-P pipeline generates species-specific repeat libraries, as well as structural annotations of protein coding genes, non-coding RNAs, and pseudogenes.

MAKER-P consists of the main engine (standard MAKER) together with a number of accessory script and protocols that are downloaded separately.


Support for MAKER is provided by a wiki, a collection of archived posts to the mailing list, and the mailing list itself. Please check for answers to your questions using those sources, in that order.
Please join the mailing list and become a member of the MAKER community.

Check out this instructional MAKER wiki.

The maker-devel list is archived on Google Groups which has archive searching capabilities. Search for answers to common questions/problems there.

Subscribe/Unsubscribe to the maker-devel mailing list to get updates on MAKER as well as ask questions not covered in the wiki or maker-devel archives.

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