[maker-devel] maker doesn't pick up where it stopped

[Carson Holt]

You would have to send me the captured STDERR.  MAKER will print out a
number of messages whenever it restarts a contig, and will explain why it
deletes any files before restarting.

Thanks,
Carson


From:  Yunfei Guo <guoyunfei1989 at gmail.com>
Date:  Friday, 3 May, 2013 12:33 PM
To:  <maker-devel at yandell-lab.org>
Subject:  [maker-devel] maker doesn't pick up where it stopped

Dear MAKER community,

I got a problem that maker doesn't pick up where it stopped last time,
rather, it will discard all previous results.

command:
echo 'mpiexec -n 12 maker -q' | qsub -V -cwd -l h_vmem=2g -pe mpich 12
maker version:
2.26
mpich version:
1.5rc3
in maker_opts:
clean_try=0 #remove all data from previous run before retrying, 1 = yes, 0 =
no
clean_up=0 #removes theVoid directory with individual analysis files, 1 =
yes, 0 = no

It never happened before. Any advice?

Thank you!

Yunfei
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