[maker-devel] maker to EvidenceModeler

[Jason Stajich]

I've used this script I wrote to make the necessary input files from maker
GFF3.

https://github.com/hyphaltip/genome-scripts/blob/master/gene_prediction/maker2evm.pl

Jason Stajich
jason at bioperl.org
http://bioperl.org/wiki/User:Jason
http://twitter.com/hyphaltip


On Tue, Mar 25, 2014 at 9:33 AM, dhivya arasappan <darasappan at gmail.com>wrote:

> Hi Carson and others,
>
> Is there an easy tool/pipeline available as part of maker utilities to
> convert maker and SNAP output to files acceptable by EvidenceModeler?
>
> It looks like it also needs just gff files, but with a few tweaks.
> EvidenceModeler seems better equipped to handle PASA annotation results
> than maker results.
>
> Thanks
> Dhivya
>
>
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