[maker-devel] FW: protein2genome gene models

Carson Holt carson.holt at genetics.utah.edu
Wed Apr 30 08:53:29 MDT 2014



From: Sivaranjani Namasivayam <ranjani at uga.edu<mailto:ranjani at uga.edu>>
Date: Wednesday, April 30, 2014 at 8:45 AM
To: "maker-devel-bounces at yandell-lab.org<mailto:maker-devel-bounces at yandell-lab.org>" <maker-devel-bounces at yandell-lab.org<mailto:maker-devel-bounces at yandell-lab.org>>
Subject: protein2genome gene models


Hi,


I want to examine the gene models predicted diectly from protein data for my genome.

MAKER has an option for this in the maker_opts.ctl file: protein2genome =1 , but it says for prokaryotes only.


Will this not work for eukaryotes? Is it because of introns?


Thanks,

Ranjani
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