[maker-devel] Quality filter perl script

Michael Campbell michael.s.campbell1 at gmail.com
Mon Dec 15 13:13:29 MST 2014


Hi Tuan,

I've attached a copy of the quality filter script. I've removed the .pl
extension because some email services will not accept them.

Take care,
Mike

On Sun, Dec 14, 2014 at 5:55 AM, Tuan Duong Anh <tuanduonganh at gmail.com>
wrote:
>
> Hi all,
>
> I successfully ran MAKER and now looking into rescuing rejected gene
> models using protein domain evidence. I have obtained the tsv file from
> interproscan and have also updated the GFF3 file with this result using
> ipr_update_gff. In the next step I will need quality_filter.pl script to
> generate the default and standard build, however this script is not
> included in my version of MAKER. Do you know where can I get this script?
>
> Thanks.
> Tuan
>
>
> _______________________________________________
> maker-devel mailing list
> maker-devel at box290.bluehost.com
> http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org
>
>

-- 
Michael Campbell MS, RD.
Doctoral Candidate
Eccles Institute of Human Genetics
University of Utah
15 North 2030 East, Room 2100
Salt Lake City, UT 84112-5330
ph:585-3543
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/attachments/20141215/7f57e7e4/attachment-0002.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: quality_filter
Type: application/octet-stream
Size: 4598 bytes
Desc: not available
URL: <http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/attachments/20141215/7f57e7e4/attachment-0002.obj>


More information about the maker-devel mailing list