[maker-devel] Problem installing maker

[carlos vargas]

Hello,

I have been trying to install maker but I've been facing several issues.
After installing all of the prerequisites I ran perl Build.PL and ./Build
install. No issues were detected. Afterwards I tried to test maker by
simply executing maker -h and got the following error:

Can't locate MAKER/ConfigData.pm in @INC (@INC contains:
~/software/maker/src/bin/../perl/lib ~/software/maker/src/bin/../lib
~/software/maker/src/bin/../src/inc/perl/lib /etc/perl
/usr/local/lib/perl/5.14.2 /usr/local/share/perl/5.14.2 /usr/lib/perl5
/usr/share/perl5 /usr/lib/perl/5.14 /usr/share/perl/5.14
/usr/local/lib/site_perl .) at ~/software/maker/src/bin/maker line 42.
BEGIN failed--compilation aborted at ~/software/maker/src/bin/maker line 42.

I found a similar thread which suggested reinstalling (which I did) but I
still face the same issue. The full messages are below.


Thank you for your help!

Carlos


~/software/maker/src$ sudo perl Build.PL

MAKER supports distributed parallelization via MPI.
Would you like to configure MAKER for MPI (This
requires that you have an MPI client installed)? [N ]
N

Would you like to install the web interface to MAKER (MWAS) on this machine
This requires that you be logged in as root or use sudo for './Build
install'? [N ]
N
Created MYMETA.yml and MYMETA.json
Creating new 'Build' script for 'MAKER' version '2.3'


The file 'Build' has been created for you to finish installing MAKER.


==============================================================================
STATUS MAKER 2.3
==============================================================================
PERL Dependencies:      VERIFIED
External Programs:      VERIFIED
External C Libraries:   VERIFIED
MPI SUPPORT:            DISABLED
MWAS Web Interface:     DISABLED
MAKER PACKAGE:          CONFIGURATION OK


Important Commands:
        ./Build installdeps     #installs missing PERL dependencies
        ./Build installexes     #installs all missing external programs
        ./Build install         #installs MAKER
        ./Build status          #Shows this status menu

Other Commands:
        ./Build repeatmasker    #installs RepeatMasker (asks for RepBase)
        ./Build blast           #installs BLAST (NCBI BLAST+)
        ./Build exonerate       #installs Exonerate (v2 on UNIX / v1 on Mac
OSX)
        ./Build snap            #installs SNAP
        ./Build augustus        #installs Augustus
        ./Build apollo          #installs Apollo
        ./Build gbrowse         #installs GBrowse (must be root)
        ./Build jbrowse         #installs JBrowse (MAKER copy, not web
accecible)
        ./Build webapollo       #installs WebApollo (use maker2wap to
create DBs)
        ./Build mpich2          #installs MPICH2 (but manual install
recommended)

~/software/maker/src$ sudo ./Build install
Building MAKER
Installing MAKER...
Building MAKER
Installing ~/software/maker/src/../perl/lib/MAKER/ConfigData.pm

~/software/maker/src$ maker -h
Can't locate MAKER/ConfigData.pm in @INC (@INC contains:
~/software/maker/src/bin/../perl/lib ~/software/maker/src/bin/../lib
~/software/maker/src/bin/../src/inc/perl/lib /etc/perl
/usr/local/lib/perl/5.14.2 /usr/local/share/perl/5.14.2 /usr/lib/perl5
/usr/share/perl5 /usr/lib/perl/5.14 /usr/share/perl/5.14
/usr/local/lib/site_perl .) at ~/software/maker/src/bin/maker line 42.
BEGIN failed--compilation aborted at ~/software/maker/src/bin/maker line 42.
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