[maker-devel] Maker fails to annotate large contigs

Schmidt, Sarah S.M.Schmidt at uva.nl
Thu Jan 30 07:30:18 MST 2014


Dear Carson,

When running maker on my genome assembly (roughly 60 Mb), it keeps failing the largest contigs with either error:

DIED RANK 3:4:0:3
DIED COUNT 2

or

DIED RANK 4:4:0:0
DIED COUNT 1
DIED RANK 4
DIED COUNT 1.

Do you know what might be the problem?

I am using Maker 2.28 with MPI support.

Thanks in advance,

Sarah


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