[maker-devel] protein2genome gene models from protein gff

[Sivaranjani Namasivayam]

Hi,


I am trying to predict gene models from protein evidence, using the parameter protein2genome set to 1.


I get gene models predicted if I provide the proteins as a fasta file, but not as gff (I want to use a gff format to avoid the blastx step again). Is this expected?


In case of transcriptome evidence and est2genome set to 1, I get gene models predicted with both fasta and gff formats.


Thanks,

Ranjani
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