[maker-devel] errors in final gff

[Anurag Priyam]

It's version 2.31.

-- Priyam

On Wed, Jun 18, 2014 at 11:41 PM, Carson Holt <carsonhh at gmail.com> wrote:
> What MAKER version are you using?
>
> --Carson
>
>
> On 6/18/14, 11:44 AM, "Anurag Priyam" <a.priyam at qmul.ac.uk> wrote:
>
>>Hi,
>>
>>I compiled all annotations generated by MAKER into a single GFF file
>>using the gff3_merge script distributed with MAKER. While formatting
>>this GFF for use with JBrowse, I found a few errors:
>>
>>1. Three instances where two features were assigned the same id.
>>2. One instance where a group of three subfeatures refer to a
>>non-existent parent.
>>
>>Here is the relevant portion of the GFF file:
>>https://gist.github.com/yeban/ffaf5cd419639dd073a7
>>
>>I worked around the issue temporarily for the job at hand, but I am
>>left wondering why would these errors creep in.
>>
>>-- Priyam
>>
>>_______________________________________________
>>maker-devel mailing list
>>maker-devel at box290.bluehost.com
>>http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org
>
>