[maker-devel] migrating annotations from old to new assembly

[Carson Holt]

Here you go, this is covered in a previous post -->
https://groups.google.com/forum/#!searchin/maker-devel/est_forward/maker-de
vel/q9fxXGKO8mk/0ATwhJvZeI4J


--Carson



On 6/19/14, 4:11 PM, "Anurag Priyam" <a.priyam at qmul.ac.uk> wrote:

>Is it possible to migrate annotations from an old assembly to a new
>assembly using MAKER?
>
>Perhaps by setting est= to transcripts (spliced? or unspliced?) from
>the previous assembly and genome= to the new assembly? Maybe ask MAKER
>to use exonerate instead of BLASTN so splice junctions are accounted
>for better?
>
>-- Priyam
>
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