[maker-devel] migrating annotations from old to new assembly

[Anurag Priyam]

Wow! Thanks :).

I apologise that I didn't look through the archives before asking.

-- Priyam

On Fri, Jun 20, 2014 at 3:46 AM, Carson Holt <carsonhh at gmail.com> wrote:
> Here you go, this is covered in a previous post -->
> https://groups.google.com/forum/#!searchin/maker-devel/est_forward/maker-de
> vel/q9fxXGKO8mk/0ATwhJvZeI4J
>
>
> --Carson
>
>
>
> On 6/19/14, 4:11 PM, "Anurag Priyam" <a.priyam at qmul.ac.uk> wrote:
>
>>Is it possible to migrate annotations from an old assembly to a new
>>assembly using MAKER?
>>
>>Perhaps by setting est= to transcripts (spliced? or unspliced?) from
>>the previous assembly and genome= to the new assembly? Maybe ask MAKER
>>to use exonerate instead of BLASTN so splice junctions are accounted
>>for better?
>>
>>-- Priyam
>>
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>
>