[maker-devel] Mapping gene names

[Carson Holt]

That should already be fixed in the current 2.31.3 download. I'll also send
you the subversion credentials in a separate e-mail.

Thanks,
Carson


From:  Shaun Jackman <sjackman at gmail.com>
Reply-To:  Shaun Jackman <sjackman at gmail.com>
Date:  Friday, May 2, 2014 at 1:40 PM
To:  Carson Holt <carsonhh at gmail.com>
Cc:  "maker-devel at yandell-lab.org" <maker-devel at yandell-lab.org>
Subject:  Re: [maker-devel] Mapping gene names

Hi, Carson. Do you happen to have a patch that I could test out that fixes
the naming of the tRNA identified by tRNAscan?

Is the MAKER subversion repository public, and if so, what’s its URL?

Cheers,
Shaun

Shaun wrote…
> 
> The integration of MAKER-P with tRNAscan is very useful. The identified genes
> are named e.g. trnascan-205522-processed-gene-0.38.  tRNA genes are
> conventionally named according to the amino acid and anticodon, such as
> trnW-CCA. Would it be possible for MAKER to name or perhaps prefix the names
> with that convention?

On 6 March 2014 12:58, Carson Holt <carsonhh at gmail.com> wrote:

> Yes.  I’ll fix the naming.
> 
> Thanks,
> Carson


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