[maker-devel] Specify multiple files to rmlib

[Shaun Jackman]

Excellent. Thanks, Carson. Is the rmlib feature included in 2.31.5? What is the purpose of the label? Does it affect the GFF file output by MAKER?


-- 
http://sjackman.ca

On 2014-May-16 at 13:33:23 , Carson Holt (carsonhh at gmail.com) wrote:

It could be done.  I've made some changes to the subversion repository if you want to test it.  You should also be able to use labels just as you can with other comma separated lists in MAKER using ':' to separate the label.

Example --> rmlib=repeats.fasta:some_label,repeats2.fasta:another_label

I've also found the other_gff issue.  It was fixed in the subversion repository but not in the release package I made the other day, so I've updated the release to 2.31.5.

--Carson




From: Shaun Jackman <sjackman at gmail.com>
Reply-To: Shaun Jackman <sjackman at gmail.com>
Date: Friday, May 16, 2014 at 11:16 AM
To: "maker-devel at yandell-lab.org" <maker-devel at yandell-lab.org>
Subject: [maker-devel] Specify multiple files to rmlib

Hi, Carson. Some options of maker accept multiple files as a comma separated list, but  
rmlib does not. Could it?

Thanks!
Shaun

P.S. Any update on the fix to  
other_gff?

http://sjackman.ca

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