[maker-devel] Genbank submission

Carson Holt carsonhh at gmail.com
Fri May 15 09:48:20 MDT 2015


Here is an archived thread on this that might be useful as well —>

https://groups.google.com/forum/#!searchin/maker-devel/genbank/maker-devel/qypkypBXVjs/aJACj38DpxMJ <https://groups.google.com/forum/#!searchin/maker-devel/genbank/maker-devel/qypkypBXVjs/aJACj38DpxMJ>

—Carson


> On May 15, 2015, at 1:08 AM, Bert Brutzel <bertbrutzel at googlemail.com> wrote:
> 
> Dear All,
> 
> how to I reformat MAKER output to valid .tbl files for Genbank submission?
> I already tried quite some routes of formating the .gff to a .tbl (e.g. sed+awk+GAG....) but I simply run into to many problems? I as well tried to load the data into a chado, but this took over two weeks and exited with errors. Maybe someone who already submitted their MAKER annotated genome to Genbank can help me...PLEASE.
> 
> Thank you very much,
> Bert
> 
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