[maker-devel] choosing the right gene model

[Xabier Vázquez-Campos]

Hi there,

I was visualising the annotations and I realised that in some cases, what
it seems to be a gene is splitted according to one of the gene models,
despite that the other 2, est2genome and prot2genome suggest that it isn't
the case.



Although the opposite also happens.


​
For some reason, the "out of place" model is always (or almost) the one
from Genemark.

How much weight does carry the RNAseq and protein data on this decision (if
any)?
How exactly is the final gene selected?

Cheers,
Xabi

-- 
Xabier Vázquez-Campos, *PhD*
*Research Associate*
NSW Systems Biology Initiative
School of Biotechnology and Biomolecular Sciences
The University of New South Wales
Sydney NSW 2052 AUSTRALIA
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