[maker-devel] large UTR overhang

[Timo Metz]

Hey guys,

Attached there is a picture of a recent MAKER run where I used pacbio reads
and trinity assembled short reads plus proteins from Swissprot. I don't
really get why MAKER assigns such a large fraction to be a UTR. From the
name I can tell that the final gene model stems from a snap ab-initio
prediction but even that gene prediction is not 100% identical to the part
of the gene model which is not UTR.

Is there any setting in MAKER in which I can somehow have an influence on
how MAKER assigns such UTRs? I already tried out the "correct_est_fusion"
option but it did not help.

best

Timo
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