[maker-devel] maker3

[Carson Holt]

The maker 3 beta is one of the links when you registre to download maker. IT will be the link directly under the stable release link —>
http://yandell.topaz.genetics.utah.edu/cgi-bin/maker_license.cgi <http://yandell.topaz.genetics.utah.edu/cgi-bin/maker_license.cgi>

Also you can use grep to pull out specific lines of a gff3 file. Example:
    grep -P "\tprotein2genome\t" all.gff > protein2genome.gff

That command will grab all the protein2genome features out of a file.

—Carson


> On Oct 18, 2018, at 2:29 AM, Linnie Linnie <peachandolives at gmail.com> wrote:
> 
> Dear maker team,
> 
> I am trying to run maker and use its input for EVM. From the EVM website, I gather that I need to provide it with .gff files. Maker2 does output one .gff, but I was wondering how to produce .gff files for the proteins and ETS data. 
> 
> Alternatively, I have read that maker3 implements EVM. I would be happy to try this option, but I don't know where can I download maker3 from. 
> 
> I would appreciate any help. Thank you very much!
> 
> Linnie
> 
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