[maker-devel] Annotations from high confidence IsoSeq data

[DECKER, KEITH F [AG/1005]]

I have a set of high confidence full length transcripts generated via the pacbio IsoSeq pipeline.

Is there a recommended way to pass these transcripts to MAKER and ensure that the corresponding gene models are included in the final annotation?  I also have assembled illumina transcripts, but I’m trying to figure out how to give the IsoSeq transcripts a higher ‘weight’.

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