Publications:

Nash D Arrington CB Kennedy BJ Yandell M Wu W Zhang W Ware S Jorde LB Gruber PJ Yost HJ Bowles NE Bleyl SB
PLoS One. 2015 Jun 29;10(6):e0131514

PDF
Safavi-Hemami H Gajewiak J Karanth S Robinson SD Ueberheide B Douglass AD Schlegel A Imperial JS Watkins M Bandyopadhyay PK Yandell M Li Q Purcell AW Norton RS Ellgaard L Olivera BM
Proc Natl Acad Sci U S A. 2015 Feb 10;112(6):1743-8

PDF
Galati DF Bonney S Kronenberg Z Clarissa C Yandell M Elde NC Jerka-Dziadosz M Giddings TH Frankel J Pearson CG
J Cell Biol. 2014 Dec 22;207(6):705-15

PDF
Schrader L Kim JW Ence D Zimin A Klein A Wyschetzki K Weichselgartner T Kemena C Stökl J Schultner E Wurm Y Smith CD Yandell M Heinze J Gadau J Oettler J
Nat Commun. 2014 Dec 16;5:5495

PDF
Campbell MS Holt C Moore B Yandell M
Curr Protoc Bioinformatics. 2014 Dec 12;48:4.11.1-4.11.39

PDF
Law M Childs KL Campbell MS Stein JC Olson AJ Holt C Panchy N Lei J Jiao D Andorf CM Lawrence CJ Ware D Shiu SH Sun Y Jiang N Yandell M
Plant Physiol. 2015 Jan;167(1):25-39

PDF
Darlington TM Pimentel R Smith K Bakian AV Jerominski L Cardon J Camp NJ Callor WB Grey T Singleton M Yandell M Renshaw PF Yurgelun-Todd DA Gray D Coon H
Transl Psychiatry. 2014 Oct 21;4:e471

PDF
Murphy MM Keefe AC Lawson JA Flygare SD Yandell M Kardon G
Stem Cell Reports. 2014 Sep 9;3(3):475-88

PDF
Carbone L Harris RA Gnerre S Veeramah KR Lorente-Galdos B Huddleston J Meyer TJ Herrero J Roos C Aken B Anaclerio F Archidiacono N Baker C Barrell D Batzer MA Beal K Blancher A Bohrson CL Brameier M Campbell MS Capozzi O Casola C Chiatante G Cree A Damert A de Jong PJ Dumas L Fernandez-Callejo M Flicek P Fuchs NV Gut I Gut M Hahn MW Hernandez-Rodriguez J Hillier LW Hubley R Ianc B Izsvák Z Jablonski NG Johnstone LM Karimpour-Fard A Konkel MK Kostka D Lazar NH Lee SL Lewis LR Liu Y Locke DP Mallick S Mendez FL Muffato M Nazareth LV Nevonen KA O'Bleness M Ochis C Odom DT Pollard KS Quilez J Reich D Rocchi M Schumann GG Searle S Sikela JM Skollar G Smit A Sonmez K ten Hallers B Terhune E Thomas GW Ullmer B Ventura M Walker JA Wall JD Walter L Ward MC Wheelan SJ Whelan CW White S Wilhelm LJ Woerner AE Yandell M Zhu B Hammer MF Marques-Bonet T Eichler EE Fulton L Fronick C Muzny DM Warren WC Worley KC Rogers J Wilson RK Gibbs RA
Nature. 2014 Sep 11;513(7517):195-201

PDF
Hu H Roach JC Coon H Guthery SL Voelkerding KV Margraf RL Durtschi JD Tavtigian SV Shankaracharya Wu W Scheet P Wang S Xing J Glusman G Hubley R Li H Garg V Moore B Hood L Galas DJ Srivastava D Reese MG Jorde LB Yandell M Huff CD
Nature Biotech. 2014 Jul;32(7):663-669.

PDF
Kumar P P Emechebe U Smith R Franklin S Moore B Yandell M Lessnick SL Moon AM
Elife. 2014 May 29:e02805

PDF
Singleton MV Guthery SL Voelkerding KV Chen K Kennedy B Margraf RL Durtschi J Eilbeck K Reese MG Jorde LB Huff CD Yandell M
Am J Hum Genet. 2014 Apr 3;94(4):599-610

PDF
Kennedy B Kronenberg Z Hu H Moore B Flygare S Reese MG Jorde LB Yandell M Huff C
Current Protocols in Human Genetics. 2014 Apr 24;81:6.14.1-6.14.25

PDF Example Data
Manuck TA Watkins WS Moore B Esplin MS Varner MW Jackson GM Yandell M Jorde L
Am J Obstet Gynecol. 2014 Apr;210(4)

PDF
Tang H Krishnakumar V Bidwell S Rosen B Chan A Zhou S Gentzbittel L Childs KL Yandell M Gundlach H Mayer KF Schwartz DC Town CD
BMC Genomics. 2014 Apr 27;15:312

PDF
Safavi-Hemami H Hu H Gorasia DG Bandyopadhyay PK Veith PD Young ND Reynolds EC Yandell M Olivera BM Purcell AW
Mol Cell Proteomics. 2014 Apr;13(4):938-53

PDF
Brownstein CA Beggs AH Homer N Merriman B Yu TW Flannery KC DeChene ET Towne MC Savage SK Price EN Holm IA Luquette LJ Lyon E Majzoub J Neupert P McCallie D Jr Szolovits P Willard HF Mendelsohn NJ Temme R Finkel RS Yum SW Medne L Sunyaev SR Adzhubey I Cassa CA de Bakker PI Duzkale H Dworzyński P Fairbrother W Francioli L Funke BH Giovanni MA Handsaker RE Lage K Lebo MS Lek M Leshchiner I MacArthur DG McLaughlin HM Murray MF Pers TH Polak PP Raychaudhuri S Rehm HL Soemedi R Stitziel NO Vestecka S Supper J Gugenmus C Klocke B Hahn A Schubach M Menzel M Biskup S Freisinger P Deng M Braun M Perner S Smith RJ Andorf JL Huang J Ryckman K Sheffield VC Stone EM Bair T Black-Ziegelbein EA Braun TA Darbro B DeLuca AP Kolbe DL Scheetz TE Shearer AE Sompallae R Wang K Bassuk AG Edens E Mathews K Moore SA Shchelochkov OA Trapane P Bossler A Campbell CA Heusel JW Kwitek A Maga T Panzer K Wassink T Van Daele D Azaiez H Booth K Meyer N Segal MM Williams MS Tromp G White P Corsmeier D Fitzgerald-Butt S Herman G Lamb-Thrush D McBride KL Newsom D Pierson CR Rakowsky AT Maver A Lovrečić L Palandačić A Peterlin B Torkamani A Wedell A Huss M Alexeyenko A Lindvall JM Magnusson M Nilsson D Stranneheim H Taylan F Gilissen C Hoischen A van Bon B Yntema H Nelen M Zhang W Sager J Zhang L Blair K Kural D Cariaso M Lennon GG Javed A Agrawal S Ng PC Sandhu KS Krishna S Veeramachaneni V Isakov O Halperin E Friedman E Shomron N Glusman G Roach JC Caballero J Cox HC Mauldin D Ament SA Rowen L Richards DR Lucas FA Gonzalez-Garay ML Caskey CT Bai Y Huang Y Fang F Zhang Y Wang Z Barrera J Garcia-Lobo JM González-Lamuño D Llorca J Rodriguez MC Varela I Reese MG De La Vega FM Kiruluta E Cargill M Hart RK Sorenson JM Lyon GJ Stevenson DA Bray BE Moore BM Eilbeck K Yandell M Zhao H Hou L Chen X Yan X Chen M Li C Yang C Gunel M Li P Kong Y Alexander AC Albertyn ZI Boycott KM Bulman DE Gordon PM Innes AM Knoppers BM Majewski J Marshall CR Parboosingh JS Sawyer SL Samuels ME Schwartzentruber J Kohane IS Margulies DM
Genome Biol. 2014 Mar 25;15(3):R53

PDF
Chapin A Hu H Rynearson SG Hollien J Yandell M Metzstein MM
G3. 2014 Mar 20;4(3):485-96

PDF
Neale DB Wegrzyn JL Stevens KA Zimin AV Puiu D Crepeau MW Cardeno C Koriabine M Holtz-Morris AE Liechty JD Martínez-García PJ Vasquez-Gross HA Lin BY Zieve JJ Dougherty WM Fuentes-Soriano S Wu LS Gilbert D Marçais G Roberts M Holt C Yandell M Davis JM Smith KE Dean JF Lorenz WW Whetten RW Sederoff R Wheeler N McGuire PE Main D Loopstra CA Mockaitis K deJong PJ Yorke JA Salzberg SL Langley CH
Genome Biol. 2014 Mar 4;15(3):R59

PDF
Wegrzyn JL Liechty JD Stevens KA Wu LS Loopstra CA Vasquez-Gross HA Dougherty WM Lin BY Zieve JJ Martínez-García PJ Holt C Yandell M Zimin AV Yorke JA Crepeau MW Puiu D Salzberg SL Dejong PJ Mockaitis K Main D Langley CH Neale DB
Genetics. 2014 Mar;196(3):891-909

PDF
Chen K Wu W Mathew D Zhang Y Browne SK Rosen LB McManus MP Pulsipher MA Yandell M Bohnsack JF Jorde LB Notarangelo LD Walter JE
J Allergy Clin Immunol. 2014 Mar;133(3):880-2.e10

PDF
Kumar P P Franklin S Emechebe U Hu H Moore B Lehman C Yandell M Moon AM
PLoS Genet. 2014 Mar 27;10(3):e1004247

PDF
Domyan ET Guernsey MW Kronenberg Z Krishnan S Boissy RE Vickrey AI, Rodgers C Cassidy P Leachman SA Fondon JW 3rd Yandell M Shapiro MD
Curr Biol. 2014 Feb 17;24(4):459-64

PDF
Campbell MS Law M Holt C Stein JC Moghe GD Hufnagel DE Lei J Achawanantakun R Jiao D Lawrence CJ Ware D Shiu SH Childs KL Sun Y Jiang N Yandell M
Plant Physiol. 2014 Feb;164(2):513-24

PDF
Castoe TA de Koning AP Hall KT Card DC Schield DR Fujita MK Ruggiero RP Degner JF Daza JM Gu W Reyes-Velasco J Shaney KJ Castoe JM Fox SE Poole AW Polanco D Dobry J Vandewege MW Li Q Schott RK Kapusta A Minx P Feschotte C Uetz P Ray DA Hoffmann FG Bogden R Smith EN Chang BS Vonk FJ Casewell NR Henkel CV Richardson MK Mackessy SP Bronikowski AM Yandell M Warren WC Secor SM Pollock DD
Proc Natl Acad Sci U S A. 2013 Dec 17;110(51):20645-50

PDF
Vonk FJ Casewell NR Henkel CV Heimberg AM Jansen HJ McCleary RJ Kerkkamp HM Vos RA Guerreiro I Calvete JJ Wüster W Woods AE Logan JM Harrison RA Castoe TA de Koning AP Pollock DD Yandell M Calderon D Renjifo C Currier RB Salgado D Pla D Sanz L Hyder AS Ribeiro JM Arntzen JW van den Thillart GE Boetzer M Pirovano W Dirks RP Spaink HP Duboule D McGlinn E Kini RM Richardson MK
Proc Natl Acad Sci U S A. 2013 Dec 17;110(51):20651-6

PDF
Ul-Hasan S Burgess DM Gajewiak J Li Q Hu H Yandell M Olivera BM Bandyopadhyay PK
Toxicon. 2013 Nov;74:215-24

PDF
Flygare S Campbell M Ross RM Moore B Yandell M
J Comput Biol. 2013 Aug;20(8):583-92

PDF
Ming R VanBuren R Liu Y Yang M Han Y Li LT Zhang Q Kim MJ Schatz MC Campbell M Li J Bowers JE Tang H Lyons E Ferguson AA Narzisi G Nelson DR Blaby-Haas CE Gschwend AR Jiao Y Der JP Zeng F Han J Min XJ Hudson KA Singh R Grennan AK Karpowicz SJ Watling JR Ito K Robinson SA Hudson ME Yu Q Mockler TC Carroll A Zheng Y Sunkar R Jia R Chen N Arro J Wai CM Wafula E Spence A Han Y Xu L Zhang J Peery R Haus MJ Xiong W Walsh JA Wu J Wang ML Zhu YJ Paull RE Britt AB Du C Downie SR Schuler MA Michael TP Long SP Ort DR William Schopf J Gang DR Jiang N Yandell M dePamphilis CW Merchant SS Paterson AH Buchanan BB Li S Shen-Miller J
Genome Biol. 2013 May 10;14(5):R41

PDF
Amemiya CT Alföldi J Lee AP Fan S Philippe H Maccallum I Braasch I Manousaki T Schneider I Rohner N Organ C Chalopin D Smith JJ Robinson M Dorrington RA Gerdol M Aken B Biscotti MA Barucca M Baurain D Berlin AM Blatch GL Buonocore F Burmester T Campbell MS Canapa A Cannon JP Christoffels A De Moro G Edkins AL Fan L Fausto AM Feiner N Forconi M Gamieldien J Gnerre S Gnirke A Goldstone JV Haerty W Hahn ME Hesse U Hoffmann S Johnson J Karchner SI Kuraku S Lara M Levin JZ Litman GW Mauceli E Miyake T Mueller MG Nelson DR Nitsche A Olmo E Ota T Pallavicini A Panji S Picone B Ponting CP Prohaska SJ Przybylski D Saha NR Ravi V Ribeiro FJ Sauka-Spengler T Scapigliati G Searle SM Sharpe T Simakov O Stadler PF Stegeman JJ Sumiyama K Tabbaa D Tafer H Turner-Maier J van Heusden P White S Williams L Yandell M Brinkmann H Volff JN Tabin CJ Shubin N Schartl M Jaffe DB Postlethwait JH Venkatesh B Di Palma F Lander ES Meyer A Lindblad-Toh K
Nature. 2013 Apr 18;496(7445):311-6

PDF
Kapusta A Kronenberg Z Lynch VJ Zhuo X Ramsay L Bourque G Yandell M Feschotte C
PLoS Genet. 2013 Apr;9(4):e1003470

PDF
Shapiro MD, Kronenberg Z, Li C, Domyan ET, Pan H, Campbell M, Tan H, Huff CD, Hu H, Vickrey AI, Nielsen SCA, Stringham SA, Hu H, Willerslev E, Gilbert MTP, Yandell M, Zhang G, Wang J.
Science. 2013 Mar 1;339(6123):1063-7

PDF
Vieler A, Wu G, Tsai CH, Bullard B, Cornish AJ, Harvey C, Reca IB, Thornburg C, Achawanantakun R, Buehl CJ, Campbell MS, Cavalier D, Childs KL, Clark TJ, Deshpande R, Erickson E, Armenia Ferguson A, Handee W, Kong Q, Li X, Liu B, Lundback S, Peng C, Roston RL, Sanjaya, Simpson JP, Terbush A, Warakanont J, Zauner S, Farre EM, Hegg EL, Jiang N, Kuo MH, Lu Y, Niyogi KK, Ohlrogge J, Osteryoung KW, Shachar-Hill Y, Sears BB, Sun Y, Takahashi H, Yandell M, Shiu SH, Benning C.
PLoS Genet. 2012;8(11)

PDF
Smith JJ, Kuraku S, Holt C, Sauka-Spengler T, Jiang N, Campbell MS, Yandell M, Manousaki T, Meyer A, Bloom OE, Morgan JR, Buxbaum JD, Sachidanandam R, Sims C, Garruss AS, Cook M, Krumlauf R, Wiedemann LM, Sower SA, Decatur WA, Hall JA, Amemiya CT, Saha NR, Buckley KM, Rast JP, Das S, Hirano M, McCurley N, Guo P, Rohner N, Tabin CJ, Piccinelli P, Elgar G, Ruffier M, Aken BL, Searle SM, Muffato M, Pignatelli M, Herrero J, Jones M, Brown CT, Chung-Davidson YW, Nanlohy KG, Libants SV, Yeh CY, McCauley DW, Langeland JA, Pancer Z, Fritzsch B, de Jong PJ, Zhu B, Fulton LL, Theising B, Flicek P, Bronner ME, Warren WC, Clifton SW, Wilson RK, Li W.
Nat Genet. 2013 Feb 24.

PDF
Yandell M, Ence D.
Nat Rev Gen. 2012 May

PDF
Yandell M, Huff CD, Hu H, Singleton M, Moore B, Xing J, Jorde L, Reese MG.
Genome Res. 2011 Sep;21(9):1529-42

PDF
Rope AF, Wang K, Evjenth R, Xing J, Johnston JJ, Swensen JJ, Johnson WJ, Moore B, Huff CD, Bird LM, Carey JC, Opitz JM, Stevens CA, Jiang T, Schank C, Fain HD, Robison R, Dalley B, Chin S, South ST, Pysher TJ, Jorde LB, Hakonarson H, Lillehaug JR, Biesecker LG, Yandell M, Arnesen T, Lyon GJ.
Am J Hum Genet. 2011 Jul 15;89(1):28-43

PDF
Moore B, Hu H, Singleton M, De La Vega FM, Reese MG, Yandell M.
Genet Med. 2011 Mar;13(3):210-7

PDF
Suen G, Teiling C, Li L, Holt C, Abouheif E, Bornberg-Bauer E, Bouffard P, Caldera EJ, Cash E, Cavanaugh A, Denas O, Elhaik E, Fave M-J, Gadau J, Gibson JD, Graur D, Grubbs KJ, Hagen DE, Harkins TT, Helmkampf M, Hu H, Johnson BR, Kim J, Marsh SE, Moeller JA, Munoz-Torres MC, Murphy MC, Naughton MC, Nigam S, Overson R, Rajakumar R, Reese JT, Scott JJ, Smith CR, Tao S, Tsutsui ND, Viljakainen L, Wissler L, Yandell M, Zimmer F, Taylor J, Slater SC, Clifton SW, Warren WC, Elsik CG, Smith CD, Weinstock GM, Gerardo NM, Currie CR.
PLoS Genet. 2011 Feb 10;7(2)

PDF
Smith C R, Smith C D, Robertson H M, Helmkampf M, Zimin A, Yandell M, Holt C, Hu H, Abouheif E, Benton R, Cash E, Croset V, Currie C R, Elhaik E, Elsik C G, Fave M-J, Fernandes V, Gibson J D, Graur D, Gronenberg W, Grubbs K J, Hagen D E, Viniegra A S I, Johnson B R, Johnson R M, Khila A, Kim J W, Mathis K A, Munoz-Torres M C, Murphy M C, Mustard J A, Nakamura R, Niehuis O, Nigam S, Overson R P, Placek J E, Rajakumar R, Reese J T, Suen G, Tao S, Torres C W, Tsutsui N D, Viljakainen L, Wolschin F, Gadau J.
Proc Natl Acad Sci U S A. 2011 Jan 31

PDF
Smith C D, Zimin A, Holt C, Abouheif E, Benton R, Cash E, Croset, V, Currie C R, Elhaik E, Elsik C G, Fave M-J, Fernandes V, Gadau J, Gibson J D, Graur D, Grubbs K J, Hagen D E, Helmkampf M, Holley J-A, Hu H, Viniegra A S I, Johnson B R, Johnson R M, Khila A, Kim J W, Laird J, Mathis K A, Moeller J A, Munoz-Torres M C, Murphy M C, Nakamura R, Nigam S, Overson R P, Placek J E, Rajakumar R, Reese J T, Robertsonl H M, Smith C R, Suarez A V, Suen G, Suhr E L, Tao S, Torres C W, Wilgenburg E van, Viljakainen L, Walden K K O, Wild A L, Yandell M, Yorke J A, Tsutsui N D.
Proc Natl Acad Sci U S A. 2011 Jan 31

PDF
Hu H, Bandyopadhyay P, Olivera B, Yandell M.
BMC Genomics. 2011; 12: 60

PDF
Reese MG, Moore B, Batchelor C, Salas F, Cunningham F, Marth G, Stein L, Flicek P, Yandell M, Eilbeck K.
Genome Biology 2010, 11:R88

PDF
Kovach A, Wegrzyn JL, Parra G, Holt C, Bruening GE, Loopstra CA, Hartigan J, Yandell M, Langley CH, Korf I, Neale DB.
BMC Genomics 2010, Jul 7;11(1):420.

PDF
Levesque CA, Brouwer H, Cano L, Hamilton JP, Holt C, Huitema E, Raffaele S, Robideau GP, Thines M, Win J, Zerillo MM, Beakes GW, Boore JL, Busam D, Dumas B, Ferriera S, Fuerstenberg SI, Gachon CM, Gaulin E, Govers F, Grenville-Briggs L, Horner N, Hostetler J, Jiang RH, Johnson J, Krajaejun T, Lin H, Meijer HJ, Moore B, Morris P, Phuntmart V, Puiu D, Shetty J, Stajich JE, Tripathy S, Wawra S, van West P, Whitty BR, Coutinho PM, Henrissat B, Martin F, Thomas PD, Tyler BM, De Vries RP, Kamoun S, Yandell M, Tisserat N, Buell CR.
Genome Biol. 2010 Jul 13;11(7):R73.

PDF
Eilbeck K, Moore B, Holt C, Yandell M.
BMC Bioinformatics 2009, 10:67

PDF Software
Yandell M, Moore B, Salas F, Mungall CJ, MacBride A, White C, Reese MG.
PLoS Computational Biology. 2008 4(11).

PDF Supplemental Data
Cantarel B, Korf I, Robb SMC, Parra G, Ross E, Moore B, Holt C, Sanchez Alvarado A, Yandell M.
Genome Research 2008 18(1) 188-96.

PDF Software
Smith CD, Edgar RC, Yandell M, Smith DR, Celniker SE, Myers EW, Karpen GH.
Gene 2007 389(1):1-9.

PDF Software
Yandell M, Mungall CJ, Prochnik S, Smith C, Kaminker J, Hartzell G, Lewis S, Rubin GM.
PLoS Compututational Biology 2006 2(3).

PDF
Yandell M, Bailey AM, Misra S, Shu S, Wiel C, Evans-Holm M, Celniker SE, Rubin GM.
PNAS 2005 102(5):1566-1571.

PDF
Eilbeck K, Lewis SE, Mungall CJ, Yandell M, Stein L, Durbin R, Ashburner M.
Genome Biology 2005 6:R44.

PDF WWW
Majoros WH, Subramanian GM, Yandell M.
Bioinformatics 2003 19(3):402-7.

PDF
Zdobnov EM, von Mering C, Letunic I, Torrents D, Suyama M, Copley RR, Christophides GK, Thomasova D, Holt RA, Subramanian GM, Mueller HM, Dimopoulos G, Law JH, Wells MA, Birney E, Charlab R, Halpern AL, Kokoza E, Kraft CL, Lai Z, Lewis S, Louis C, Barillas-Mury C, Nusskern D, Rubin GM, Salzberg SL, Sutton GG, Topalis P, Wides R, Wincker P, Yandell M, Collins FH, Ribeiro J, Gelbart WM, Kafatos FC, Bork P.
Science 2000 298(5591):149-59.

PDF
Holt RA, Subramanian GM, Halpern A, Sutton GG, Charlab R, Nusskern DR, Wincker P, Clark AG, Ribeiro JM, Wides R, Salzberg SL, Loftus B, Yandell M, Majoros WH, Rusch DB, Lai Z, Kraft CL, Abril JF, Anthouard V, Arensburger P, Atkinson PW, Baden H, de Berardinis V, Baldwin D, Benes V, Biedler J, Blass C, Bolanos R, Boscus D, Barnstead M, Cai S, Center A, Chaturverdi K, Christophides GK, Chrystal MA, Clamp M, Cravchik A, Curwen V, Dana A, Delcher A, Dew I, Evans CA, Flanigan M, Grundschober-Freimoser A, Friedli L, Gu Z, Guan P, Guigo R, Hillenmeyer ME, Hladun SL, Hogan JR, Hong YS, Hoover J, Jaillon O, Ke Z, Kodira C, Kokoza E, Koutsos A, Letunic I, Levitsky A, Liang Y, Lin JJ, Lobo NF, Lopez JR, Malek JA, McIntosh TC, Meister S, Miller J, Mobarry C, Mongin E, Murphy SD, O'Brochta DA, Pfannkoch C, Qi R, Regier MA, Remington K, Shao H, Sharakhova MV, Sitter CD, Shetty J, Smith TJ, Strong R, Sun J, Thomasova D, Ton LQ, Topalis P, Tu Z, Unger MF, Walenz B, Wang A, Wang J, Wang M, Wang X, Woodford KJ, Wortman JR, Wu M, Yao A, Zdobnov EM, Zhang H, Zhao Q, Zhao S, Zhu SC, Zhimulev I, Coluzzi M, della Torre A, Roth CW, Louis C, Kalush F, Mural RJ, Myers EW, Adams MD, Smith HO, Broder S, Gardner MJ, Fraser CM, Birney E, Bork P, Brey PT, Venter JC, Weissenbach J, Kafatos FC, Collins FH, Hoffman SL.
Science 2002 298(5591):129-49.

PDF
Yandell M, Majoros WH.
Nature Review Genetics 2002 (8):601-10.

PDF
Mural RJ, Adams MD, Myers EW, Smith HO, Miklos GL, Wides R, Halpern A, Li PW, Sutton GG, Nadeau J, Salzberg SL, Holt RA, Kodira CD, Lu F, Chen L, Deng Z, Evangelista CC, Gan W, Heiman TJ, Li J, Li Z, Merkulov GV, Milshina NV, Naik AK, Qi R, Shue BC, Wang A, Wang J, Wang X, Yan X, Ye J, Yooseph S, Zhao Q, Zheng L, Zhu SC, Biddick K, Bolanos R, Delcher AL, Dew IM, Fasulo D, Flanigan MJ, Huson DH, Kravitz SA, Miller JR, Mobarry CM, Reinert K, Remington KA, Zhang Q, Zheng XH, Nusskern DR, Lai Z, Lei Y, Zhong W, Yao A, Guan P, Ji RR, Gu Z, Wang ZY, Zhong F, Xiao C, Chiang CC, Yandell M, Wortman JR, Amanatides PG, Hladun SL, Pratts EC, Johnson JE, Dodson KL, Woodford KJ, Evans CA, Gropman B, Rusch DB, Venter E, Wang M, Smith TJ, Houck JT, Tompkins DE, Haynes C, Jacob D, Chin SH, Allen DR, Dahlke CE, Sanders R, Li K, Liu X, Levitsky AA, Majoros WH, Chen Q, Xia AC, Lopez JR, Donnelly MT, Newman MH, Glodek A, Kraft CL, Nodell M, Ali F, An HJ, Baldwin-Pitts D, Beeson KY, Cai S, Carnes M, Carver A, Caulk PM, Center A, Chen YH, Cheng ML, Coyne MD, Crowder M, Danaher S, Davenport LB, Desilets R, Dietz SM, Doup L, Dullaghan P, Ferriera S, Fosler CR, Gire HC, Gluecksmann A, Gocayne JD, Gray J, Hart B, Haynes J, Hoover J, Howland T, Ibegwam C, Jalali M, Johns D, Kline L, Ma DS, MacCawley S, Magoon A, Mann F, May D, McIntosh TC, Mehta S, Moy L, Moy MC, Murphy BJ, Murphy SD, Nelson KA, Nuri Z, Parker KA, Prudhomme AC, Puri VN, Qureshi H, Raley JC, Reardon MS, Regier MA, Rogers YH, Romblad DL, Schutz J, Scott JL, Scott R, Sitter CD, Smallwood M, Sprague AC, Stewart E, Strong RV, Suh E, Sylvester K, Thomas R, Tint NN, Tsonis C, Wang G, Wang G, Williams MS, Williams SM, Windsor SM, Wolfe K, Wu MM, Zaveri J, Chaturvedi K, Gabrielian AE, Ke Z, Sun J, Subramanian G, Venter JC, Pfannkoch CM, Barnstead M, Stephenson LD.
Science 2002 296(5573):1661-71.

PDF
Kerlavage A, Bonazzi V, di Tommaso M, Lawrence C, Li P, Mayberry F, Mural R, Nodell M, Yandell M, Zhang J, Thomas P.
Nucleic Acids Research 2002 30(1):129-36.

PDF
Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, Sutton GG, Smith HO, Yandell M, Evans CA, Holt RA, Gocayne JD, Amanatides P, Ballew RM, Huson DH, Wortman JR, Zhang Q, Kodira CD, Zheng XH, Chen L, Skupski M, Subramanian G, Thomas PD, Zhang J, Gabor Miklos GL, Nelson C, Broder S, Clark AG, Nadeau J, McKusick VA, Zinder N, Levine AJ, Roberts RJ, Simon M, Slayman C, Hunkapiller M, Bolanos R, Delcher A, Dew I, Fasulo D, Flanigan M, Florea L, Halpern A, Hannenhalli S, Kravitz S, Levy S, Mobarry C, Reinert K, Remington K, Abu-Threideh J, Beasley E, Biddick K, Bonazzi V, Brandon R, Cargill M, Chandramouliswaran I, Charlab R, Chaturvedi K, Deng Z, Di Francesco V, Dunn P, Eilbeck K, Evangelista C, Gabrielian AE, Gan W, Ge W, Gong F, Gu Z, Guan P, Heiman TJ, Higgins ME, Ji RR, Ke Z, Ketchum KA, Lai Z, Lei Y, Li Z, Li J, Liang Y, Lin X, Lu F, Merkulov GV, Milshina N, Moore HM, Naik AK, Narayan VA, Neelam B, Nusskern D, Rusch DB, Salzberg S, Shao W, Shue B, Sun J, Wang Z, Wang A, Wang X, Wang J, Wei M, Wides R, Xiao C, Yan C, Yao A, Ye J, Zhan M, Zhang W, Zhang H, Zhao Q, Zheng L, Zhong F, Zhong W, Zhu S, Zhao S, Gilbert D, Baumhueter S, Spier G, Carter C, Cravchik A, Woodage T, Ali F, An H, Awe A, Baldwin D, Baden H, Barnstead M, Barrow I, Beeson K, Busam D, Carver A, Center A, Cheng ML, Curry L, Danaher S, Davenport L, Desilets R, Dietz S, Dodson K, Doup L, Ferriera S, Garg N, Gluecksmann A, Hart B, Haynes J, Haynes C, Heiner C, Hladun S, Hostin D, Houck J, Howland T, Ibegwam C, Johnson J, Kalush F, Kline L, Koduru S, Love A, Mann F, May D, McCawley S, McIntosh T, McMullen I, Moy M, Moy L, Murphy B, Nelson K, Pfannkoch C, Pratts E, Puri V, Qureshi H, Reardon M, Rodriguez R, Rogers YH, Romblad D, Ruhfel B, Scott R, Sitter C, Smallwood M, Stewart E, Strong R, Suh E, Thomas R, Tint NN, Tse S, Vech C, Wang G, Wetter J, Williams S, Williams M, Windsor S, Winn-Deen E, Wolfe K, Zaveri J, Zaveri K, Abril JF, Guigo R, Campbell MJ, Sjolander KV, Karlak B, Kejariwal A, Mi H, Lazareva B, Hatton T, Narechania A, Diemer K, Muruganujan A, Guo N, Sato S, Bafna V, Istrail S, Lippert R, Schwartz R, Walenz B, Yooseph S, Allen D, Basu A, Baxendale J, Blick L, Caminha M, Carnes-Stine J, Caulk P, Chiang YH, Coyne M, Dahlke C, Mays A, Dombroski M, Donnelly M, Ely D, Esparham S, Fosler C, Gire H, Glanowski S, Glasser K, Glodek A, Gorokhov M, Graham K, Gropman B, Harris M, Heil J, Henderson S, Hoover J, Jennings D, Jordan C, Jordan J, Kasha J, Kagan L, Kraft C, Levitsky A, Lewis M, Liu X, Lopez J, Ma D, Majoros W, McDaniel J, Murphy S, Newman M, Nguyen T, Nguyen N, Nodell M, Pan S, Peck J, Peterson M, Rowe W, Sanders R, Scott J, Simpson M, Smith T, Sprague A, Stockwell T, Turner R, Venter E, Wang M, Wen M, Wu D, Wu M, Xia A, Zandieh A, Zhu X.
Science 2001 291(5507):1304-51.

PDF
Jin S, Martinek S, Joo WS, Wortman JR, Mirkovic N, Sali A, Yandell M, Pavletich NP, Young MW, Levine AJ.
PNAS 2000 97(13):7301-6.

PDF
Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA, Galle RF, George RA, Lewis SE, Richards S, Ashburner M, Henderson SN, Sutton GG, Wortman JR, Yandell M, Zhang Q, Chen LX, Brandon RC, Rogers YH, Blazej RG, Champe M, Pfeiffer BD, Wan KH, Doyle C, Baxter EG, Helt G, Nelson CR, Gabor GL, Abril JF, Agbayani A, An HJ, Andrews-Pfannkoch C, Baldwin D, Ballew RM, Basu A, Baxendale J, Bayraktaroglu L, Beasley EM, Beeson KY, Benos PV, Berman BP, Bhandari D, Bolshakov S, Borkova D, Botchan MR, Bouck J, Brokstein P, Brottier P, Burtis KC, Busam DA, Butler H, Cadieu E, Center A, Chandra I, Cherry JM, Cawley S, Dahlke C, Davenport LB, Davies P, de Pablos B, Delcher A, Deng Z, Mays AD, Dew I, Dietz SM, Dodson K, Doup LE, Downes M, Dugan-Rocha S, Dunkov BC, Dunn P, Durbin KJ, Evangelista CC, Ferraz C, Ferriera S, Fleischmann W, Fosler C, Gabrielian AE, Garg NS, Gelbart WM, Glasser K, Glodek A, Gong F, Gorrell JH, Gu Z, Guan P, Harris M, Harris NL, Harvey D, Heiman TJ, Hernandez JR, Houck J, Hostin D, Houston KA, Howland TJ, Wei MH, Ibegwam C, Jalali M, Kalush F, Karpen GH, Ke Z, Kennison JA, Ketchum KA, Kimmel BE, Kodira CD, Kraft C, Kravitz S, Kulp D, Lai Z, Lasko P, Lei Y, Levitsky AA, Li J, Li Z, Liang Y, Lin X, Liu X, Mattei B, McIntosh TC, McLeod MP, McPherson D, Merkulov G, Milshina NV, Mobarry C, Morris J, Moshrefi A, Mount SM, Moy M, Murphy B, Murphy L, Muzny DM, Nelson DL, Nelson DR, Nelson KA, Nixon K, Nusskern DR, Pacleb JM, Palazzolo M, Pittman GS, Pan S, Pollard J, Puri V, Reese MG, Reinert K, Remington K, Saunders RD, Scheeler F, Shen H, Shue BC, Siden-Kiamos I, Simpson M, Skupski MP, Smith T, Spier E, Spradling AC, Stapleton M, Strong R, Sun E, Svirskas R, Tector C, Turner R, Venter E, Wang AH, Wang X, Wang ZY, Wassarman DA, Weinstock GM, Weissenbach J, Williams SM, Woodage T, Worley KC, Wu D, Yang S, Yao QA, Ye J, Yeh RF, Zaveri JS, Zhan M, Zhang G, Zhao Q, Zheng L, Zheng XH, Zhong FN, Zhong W, Zhou X, Zhu S, Zhu X, Smith HO, Gibbs RA, Myers EW, Rubin GM, Venter JC.
Science 2000 287(5461):2185-95.
Rubin GM, Yandell MD, Wortman JR, Gabor Miklos GL, Nelson CR, Hariharan IK, Fortini ME, Li PW, Apweiler R, Fleischmann W, Cherry JM, Henikoff S, Skupski MP, Misra S, Ashburner M, Birney E, Boguski MS, Brody T, Brokstein P, Celniker SE, Chervitz SA, Coates D, Cravchik A, Gabrielian A, Galle RF, Gelbart WM, George RA, Goldstein LS, Gong F, Guan P, Harris NL, Hay BA, Hoskins RA, Li J, Li Z, Hynes RO, Jones SJ, Kuehl PM, Lemaitre B, Littleton JT, Morrison DK, Mungall C, O'Farrell PH, Pickeral OK, Shue C, Vosshall LB, Zhang J, Zhao Q, Zheng XH, Lewis S.
Science 2000 287(5461):2204-15.

PDF
Marth GT, Korf I, Yandell M, Yeh RT, Gu Z, Zakeri H, Stitziel NO, Hillier L, Kwok PY, Gish WR.
Nature Genetics 1999 (4):452-6.

PDF