[maker-devel] Segfault during build_fasta_index

Carson Holt carsonhh at gmail.com
Wed Oct 24 06:28:10 MDT 2012


Yes.  Don't use the live version of BioPerl.  Use the CPAN version.  The
live version has a bug.

Thanks,
Carson


On 12-10-24 3:07 AM, "Fourie Joubert" <fourie.joubert at up.ac.za> wrote:

>Hi
>
>I am getting a segfault in maker somewhere during the build_fasta_index
>step.
>
>I suspect it is happening after some updates I made to bioperl.
>
>Has anyone else experienced something similar, and is there a
>recommended bioperl version?
>
>Thanks and regards!
>
>Fourie
>
>-- 
>--------------
>Prof Fourie Joubert
>Bioinformatics and Computational Biology Unit
>Department of Biochemistry
>University of Pretoria
>fourie.joubert at up.ac.za
>http://www.bi.up.ac.za
>Tel. +27-12-420-5825
>Fax. +27-12-420-5800
>
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