[maker-devel] failed gene prediction

Borhan, Hossein Hossein.Borhan at AGR.GC.CA
Mon Mar 18 14:40:38 MDT 2013


Hi

I have tried maker on a fungus genome of 45 mb with 1/3 being repeat rich. It did not produce any prediction. I am not sure what is causing this. Attached are  the STDERR and opts.ctl.  I appreciate your help


Hossein
















-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/attachments/20130318/481b5040/attachment-0002.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: wa74-maker-stderr.log
Type: application/octet-stream
Size: 6325713 bytes
Desc: wa74-maker-stderr.log
URL: <http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/attachments/20130318/481b5040/attachment-0004.obj>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: maker_opts.ctl
Type: application/octet-stream
Size: 5244 bytes
Desc: maker_opts.ctl
URL: <http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/attachments/20130318/481b5040/attachment-0005.obj>


More information about the maker-devel mailing list