[maker-devel] Why are some start positions minus in the gff result?

Carson Holt carsonhh at gmail.com
Mon Mar 25 21:24:01 MDT 2013


I haven't seen that before, so could you package up the job (all input and
control files) that generates this and send it to me.  Your using maker's
prokaryotic settings to try and get it to annotate viral genomes, correct?

--Carson

From:  Hung-Wei Hsu <ares711122 at gmail.com>
Date:  Monday, 25 March, 2013 10:50 PM
To:  <maker-devel at yandell-lab.org>
Subject:  [maker-devel] Why are some start positions minus in the gff
result?

Hi MAKER developers,

I could successfully run MAKER and get the final gff.
But I found some start positions in the gff were minus.
That led to error in the gff reader.
Is this a bug?
Could you please help to resolve this problem?
Thanks a lot in advance.

Best regards,
Hung-Wei
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