[maker-devel] Maker Virtual Machine Image

[PRAKHAR gaur]

Hello Dan,
The sample is a Prokaryotic genome, assembly size is greater than 6Mbp (rules out Web-Maker)
Maker 2.30 is beta release hence did not try it out, will do that now.
I have installed Maker before and its not a trivial task, hence the question about Virtual Machine.
Since I am already struggling with installing Prokka and DIYA.
If a virtual machine is available it would save ~ 3 days time, otherwise I will install from bottom up!

Regards,--Prakhar GaurSenior Research FellowMicrobiology @ Indian Agriculture Research InstituteNew Delhi, IN.


From: ddvanderpool at gmail.com
Subject: Re: [maker-devel] Maker Virtual Machine Image
Date: Wed, 15 Jan 2014 23:17:30 -0700
To: prakhar_aaidu16 at hotmail.com

Hello Prakhar,
Is there a reason you have not tried installing 2.30?  I have it running on Debian 7 and it was fairly straight forward.  Additionally, the multithreading speeds everything up so that I can annotate several smaller eukaryote genomes in one day.
which dependencies and libraries are the problem?  

Dan VanderpoolUniversity of MontanaMcCutcheon LabHealth Sciences 304Missoula, MT 59812Office: 406-243-6106ddvanderpool at gmail.com



On Jan 15, 2014, at 11:12 PM, PRAKHAR gaur wrote:Hello,
I am having multiple dependency related and library version issues installing Maker 2.28 on Debian 7
So would like to ask if there is a easy way out?Is there a vm image with Maker available for download from somewhere?
I know about the AWS ami used for 2103 GMOD Maker Tutorial, ami-ea661f83.
But wanted to use the vm locally, which is not possible with AWS ami's.
Any help / pointer in right direction is appreciated.
Regards,--Prakhar GaurSenior Research FellowMicrobiology @ Indian Agriculture Research InstituteNew Delhi, IN._______________________________________________
maker-devel mailing list
maker-devel at box290.bluehost.com
http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org

 		 	   		  
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/attachments/20140116/424f110f/attachment-0003.html>