[maker-devel] How to make maker output into another directory
Emmanuel Nnadi
eennadi at gmail.com
Tue Oct 1 07:59:57 MDT 2019
Hi Carson
I want marker to output into a directory /mnt/data/emmanuel/Makersupport.
Please how can I make that?
OPTS=/home/emmanuel/maker/bin
BOPTS=/home/emmanuel/maker/bin
EXE=/home/emmanuel/maker/bin
MAKER=/home/emmanuel/maker/bin
OUT=/mnt/data/emmanuel/Makersupport
${MAKER}/maker -cpus 26 ${OPTS}/maker_opts.ctl ${BOPTS}/maker_bopts.ctl
${EXE}/maker_exe.ctl
Also,
I added RepBaseRepeatMaskerEdition-20170127.tar into the directory
/home/emmanuel/maker/exe/RepeatMasker
used tar xvf RepBaseRepeatMaskerEdition-20170127.tar to unpack it. In
my /home/emmanuel/maker/exe/RepeatMasker/Libraries
I have RMRBSeqs.embl but running maker it tells me it repbase is not
installed.
Nnadi Nnaemeka Emmanuel,Ph.D
Department of Microbiology,
Faculty of Natural and Applied Science,
Plateau State University, Bokkos, Plateau State, Nigeria.
+2348068124819
Publications:
https://www.researchgate.net/profile/Emmanuel_Nnadi/publications
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